PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc06792.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 378aa MW: 41496.2 Da PI: 4.6227

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc06792.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	42.6	2e-13	53	187	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvka.eek..ewyfFskrdkkyatgk 72 f F P+d lv + L++kv++++++ + +++ d++++ P++L + + + + + ++yfFs+++ a+ + Zmw_sc06792.1.g00020.1.am.mk 53 FTFTPSDARLV-DSLRAKVANQEIPHAVYFRDDDVCSLRPEELVRrhgkparvnlR--EaG-DglQYYFFSPAHFVGASRT 129 89*******.77*****999667**********7446777755332..222.23588*999988877 PP NAM 73 rknra....tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++r+ k+ +W+a + k+v + + L ++ + + +k W+m ey++ Zmw_sc06792.1.g00020.1.am.mk 130 KRSRIiggtEKKETWHAETSLKQVEG--AVDGFMMVKLSYHVKIGEIVQKPGWLMTEYSF 187 77886455444788**999977..666778888988888899********86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	14.141	49	201	IPR003441	NAC domain
SuperFamily	SSF101941	1.57E-15	51	201	IPR003441	NAC domain
Pfam	PF02365	2.2E-8	53	186	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence Send to blast
LPKIQINRYS HHPSSPPPIS SRTPPRFAPS NSIAAVSPEI MAALGAAADD DSFTFTPSDA 60 RLVDSLRAKV ANQEIPHAVY FRDDDVCSLR PEELVRRHGK PARVNLREAG DGLQYYFFSP 120 AHFVGASRTK RSRIIGGTEK KETWHAETSL KQVEGAVDGF MMVKLSYHVK IGEIVQKPGW 180 LMTEYSFKGA GDTVLCKIYK SPRGPGRSKA SSSSSAGKRK AEDDLEGETS SMRQRHENVA 240 APEFAEHVEE SQPEPQIAPA TFEFDGSITF TLEELTNFPT GDVHTGFGAL TDGEVIAACA 300 SGGTVAELIP STMEEVQPES EVPPASTDDS MTFEELWQLL DTDIVDDGAY WQLPADEILA 360 EEWLKDKETL QHVPLSDF

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence Send to blast

LPKIQINRYS HHPSSPPPIS SRTPPRFAPS NSIAAVSPEI MAALGAAADD DSFTFTPSDA  60
RLVDSLRAKV ANQEIPHAVY FRDDDVCSLR PEELVRRHGK PARVNLREAG DGLQYYFFSP  120
AHFVGASRTK RSRIIGGTEK KETWHAETSL KQVEGAVDGF MMVKLSYHVK IGEIVQKPGW  180
LMTEYSFKGA GDTVLCKIYK SPRGPGRSKA SSSSSAGKRK AEDDLEGETS SMRQRHENVA  240
APEFAEHVEE SQPEPQIAPA TFEFDGSITF TLEELTNFPT GDVHTGFGAL TDGEVIAACA  300
SGGTVAELIP STMEEVQPES EVPPASTDDS MTFEELWQLL DTDIVDDGAY WQLPADEILA  360
EEWLKDKETL QHVPLSDF

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6280	15	45