PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc06699.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

HB-other

Protein Properties

Length: 320aa MW: 35696.5 Da PI: 4.5331

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc06699.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	21.7	3.4e-07	243	274	14	45
HHHHHHHHSSS--HHHHHHHHHHCTS-HHHHH CS Homeobox 14 eLeelFeknrypsaeereeLAkklgLterqVk 45 +L e+F+ ++yps+ +e LA++lg+t rqVk Zmw_sc06699.1.g00040.1.sm.mkhc 243 RLLEHFKTEQYPSRVVKESLAEELGITSRQVK 274 68899**************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	9.6E-6	242	274	IPR009057	Homeodomain-like
SuperFamily	SSF46689	6.42E-5	242	274	IPR009057	Homeodomain-like
CDD	cd00086	5.64E-5	242	274	No hit	No description
Pfam	PF00046	1.5E-4	243	274	IPR001356	Homeobox domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence Send to blast
MTDSRICREL PLVGNKLVLV VGFAIPPGVA RTGQVQIRHL LNLNLYRLQY NHLLKEERGV 60 DPRREARGKG AGLQRSLREM KDGCARHASD LSIEDSWEKV FPEAAALSNG SKQDDTFNLP 120 SDDSEDGDFD PDMTEGQMAS KEDGSSEEGE DGSSEEDEDE GSDSDDSNFL TSSDDSEAVT 180 DKKKVDDLGL PSEDSEDDDY DPAAMKKNGL EMAHQKRAAK NQVMLKPIYL QGKALELGLR 240 PKRLLEHFKT EQYPSRVVKE SLAEELGITS RQVKDSEDMV MDKPDVCSKE TENEDAKCDE 300 TRKKAVHWEL KKKKMGSGRS

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP32085	4	4