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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Zmw_sc06693.1.g00020.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family | bZIP | ||||||||
| Protein Properties | Length: 172aa MW: 19024.5 Da PI: 9.2917 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 50.3 | 5.2e-16 | 36 | 96 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
elkr rr+++NRe+ArrsR+RK++ ++ L+ v++L+a+ ++L+ l+ +++a+ ++++
Zmw_sc06693.1.g00020.1.sm.mkhc 36 ELKRKRRMESNRESARRSRLRKQQHLDDLTSQVDQLKAKKQQLITALNVTANNYAAAEAQN 96
79********************************************999999998877766 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SMART | SM00338 | 4.6E-15 | 34 | 98 | IPR004827 | Basic-leucine zipper domain |
| Pfam | PF00170 | 9.2E-13 | 36 | 91 | IPR004827 | Basic-leucine zipper domain |
| PROSITE profile | PS50217 | 10.381 | 36 | 78 | IPR004827 | Basic-leucine zipper domain |
| Gene3D | G3DSA:1.20.5.170 | 1.9E-11 | 38 | 83 | No hit | No description |
| SuperFamily | SSF57959 | 1.69E-11 | 38 | 89 | No hit | No description |
| CDD | cd14702 | 1.02E-15 | 39 | 90 | No hit | No description |
| PROSITE pattern | PS00036 | 0 | 41 | 56 | IPR004827 | Basic-leucine zipper domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 172 aa Download sequence Send to blast |
MSLSGGTFSS GTSSGSSLGT LSCGSEGDME LQARMELKRK RRMESNRESA RRSRLRKQQH 60 LDDLTSQVDQ LKAKKQQLIT ALNVTANNYA AAEAQNSVLR ARMMELQNRL CTLREIIYCM 120 NLNQLTNAAT VANTPSTVVS ATANYDAFGA STWNSGMQMV QQPIDQLLYQ CF |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 50 | 56 | RRSRLRK |
| 2 | 50 | 57 | RRSRLRKQ |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_025822603.1 | 1e-93 | bZIP transcription factor 44-like isoform X1 | ||||
| TrEMBL | A0A2S3I209 | 2e-92 | A0A2S3I209_9POAL; Uncharacterized protein | ||||
| STRING | Sb07g015450.1 | 2e-82 | (Sorghum bicolor) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Monocots | OGMP3740 | 32 | 76 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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