PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc06447.1.g00040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 207aa MW: 23315.6 Da PI: 9.8272 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.9 | 3.3e-52 | 36 | 164 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratk 79 pGfrFhPtdeelv++yL++kv++k+l++ e+ike+diyk++PwdLp ++++++ekewyfF+ r +ky+++ r+nr+t Zmw_sc06447.1.g00040.1.sm.mkhc 36 LPGFRFHPTDEELVSFYLRRKVARKPLSV-EIIKEMDIYKHDPWDLPkASTAGGEKEWYFFCLRGRKYRNSIRPNRVTG 113 69***************************.89***************556667899*********************** PP NAM 80 sgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 sg+Wkatg d++++s+ +g+ +glkk+Lv+y+g+a kg+ktdW+mhe+rl Zmw_sc06447.1.g00040.1.sm.mkhc 114 SGFWKATGIDRPIYSAtsSGKSIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 164 **************99888899***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.98E-55 | 35 | 171 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 51.861 | 35 | 188 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-25 | 37 | 164 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence Send to blast |
MVAKEFAREA VSLDKVKSDG EALMAAGDGE EDDVVLPGFR FHPTDEELVS FYLRRKVARK 60 PLSVEIIKEM DIYKHDPWDL PKASTAGGEK EWYFFCLRGR KYRNSIRPNR VTGSGFWKAT 120 GIDRPIYSAT SSGKSIGLKK SLVYYRGSAG KGTKTDWMMH EFRLPMAAAA NSASSSMQEA 180 VSSMLSVSTS SQRVDRQFAQ WHHKEMM |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-49 | 28 | 164 | 8 | 140 | Stress-induced transcription factor NAC1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025795725.1 | 1e-120 | transcription factor JUNGBRUNNEN 1-like | ||||
Swissprot | Q9SK55 | 2e-75 | NAC42_ARATH; Transcription factor JUNGBRUNNEN 1 | ||||
TrEMBL | A0A3L6TSA4 | 1e-122 | A0A3L6TSA4_PANMI; Transcription factor JUNGBRUNNEN 1 | ||||
STRING | Si036447m | 1e-118 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1191 | 38 | 129 |