PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc06241.1.g00030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | Dof | ||||||||
Protein Properties | Length: 288aa MW: 30419.3 Da PI: 9.6505 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 89.5 | 2.8e-28 | 170 | 227 | 4 | 61 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + l+cprC s++tkfCy+nny++ qPr++C+aC ryWt+GGalr v ++ r++ +s Zmw_sc06241.1.g00030.1.am.mk 170 EPLPCPRCGSRETKFCYFNNYNVRQPRHLCRACSRYWTAGGALRCVTTASSGRRRPRS 227 5789******************************************988766665444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 1.0E-19 | 170 | 213 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 5.9E-25 | 171 | 224 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 25.024 | 172 | 226 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 174 | 210 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence Send to blast |
MGKGVQREGI NVMRTQGKRE AMSTPQTRGT RTKQDAFPWD RELVDSADPH KNLDQHDTSR 60 DQSMIIHDKA APTKVKRLYM LHRGGVPNDA SLLPFGSMDA DAAGFKLFGK VIQPPDAHQR 120 TAEESVATPP PPPPPPPESM TPSQTLPTLP PSLPAAAAAA APSAAGGTGE PLPCPRCGSR 180 ETKFCYFNNY NVRQPRHLCR ACSRYWTAGG ALRCVTTASS GRRRPRSSAA RSASAAADAV 240 AASASSASAA DERGARACVT QCRPILPHAS ATGRPACGPA EPSCPFST |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | Sb03g030850.1 | 2e-39 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP14716 | 16 | 20 |