PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc06197.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 262aa MW: 27691.8 Da PI: 6.7414

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc06197.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31	5.4e-10	220	253	5	38
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 kr +r NR +A+rsR RK+++i eLe+ v +L Zmw_sc06197.1.g00040.1.am.mk 220 KRVKRILANRQSAQRSRVRKLQYISELERSVTTL 253 8999**************************9988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50217	8.646	218	262	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.34E-9	220	256	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.2E-10	220	254	No hit	No description
Pfam	PF00170	1.5E-8	220	254	IPR004827	Basic-leucine zipper domain
CDD	cd14703	5.30E-20	221	254	No hit	No description
PROSITE pattern	PS00036	0	223	238	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence Send to blast
MLHHQAPTSP AVPRALCTDG SLAGCDVMRS SLAGSGCPHV PKVSSHVTLQ FPFLSIALRS 60 FSRPPHKPAT QPKPHIMAQL PPRIPTAVHH WQEGGHHGAG ASAWADDFAE FAASRRGAHR 120 RSLSDSVAFV EVAPADGGAG EFDRLDDDQL MSMFPDEGGS ASAPGSENGG SDSDGDKRAA 180 AAAGEERDDE RNGDAAKMPA PGQDAAAAVA APTEFIGDPK RVKRILANRQ SAQRSRVRKL 240 QYISELERSV TTLQIDPTNI LS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription regulator. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004969997.1	1e-80	basic leucine zipper 6
Swissprot	Q5JMK6	6e-59	BZP06_ORYSJ; Basic leucine zipper 6
TrEMBL	A0A0A9PQJ5	2e-84	A0A0A9PQJ5_ARUDO; Uncharacterized protein
STRING	Pavir.Ea02752.1.p	5e-80	(Panicum virgatum)
STRING	Si002546m	5e-80	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1322	38	125

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]