PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zmw_sc06125.1.g00020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 179aa MW: 20074.5 Da PI: 8.6494 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.7 | 9.3e-12 | 81 | 137 | 3 | 59 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 e +r rr+ +NRe+ArrsR RK+ ++ eL v L + N++L +el++ ++ + Zmw_sc06125.1.g00020.1.sm.mk 81 EERRRRRMVSNRESARRSRMRKQRQLSELWAQVVYLRGANRRLLDELNRAIRDCSDV 137 67899******************************************9987777765 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.2E-10 | 74 | 136 | No hit | No description |
SMART | SM00338 | 2.4E-12 | 79 | 143 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.0E-9 | 80 | 137 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.473 | 81 | 144 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.88E-10 | 83 | 132 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 86 | 101 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 9.46E-15 | 88 | 135 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 179 aa Download sequence Send to blast |
MLHQHHYHGG LASLHCLPPP DPAFHAHYHS NMITMVPSSF NFSPAAHEPI CEAPAVAGKS 60 SAGYGGVEDV YSSHSTVMAE EERRRRRMVS NRESARRSRM RKQRQLSELW AQVVYLRGAN 120 RRLLDELNRA IRDCSDVRCE NARLEKEKAE LNTKLQGLTQ AQNTTMPSSS GPHDDTATA |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 95 | 102 | RRSRMRKQ |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_025799413.1 | 3e-81 | bZIP transcription factor 2-like | ||||
TrEMBL | A0A2T7ETI3 | 3e-80 | A0A2T7ETI3_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Ba01782.1.p | 2e-75 | (Panicum virgatum) | ||||
STRING | Pavir.Bb02514.1.p | 8e-75 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |