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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zmw_sc06090.1.g00030.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
E2F/DP |
| Protein Properties |
Length: 228aa MW: 24599.1 Da PI: 5.1934 |
| Description |
E2F/DP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zmw_sc06090.1.g00030.1 | genome | ZGD | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | E2F_TDP | 26.3 | 1.2e-08 | 79 | 117 | 3 | 38 |
E2F_TDP 3 eksLrlltqkflklleksee.givtlnevakeLvse.....d 38
+++Lr++++k ++ek+e+ g++t+neva+eLv+e +
Zmw_sc06090.1.g00030.1.sm.mkhc 79 NRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfsdpnN 117
689*******...*****999*************99776641 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0042023 | Biological Process | DNA endoreduplication |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005667 | Cellular Component | transcription factor complex |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 228 aa
Download sequence Send
to blast |
MVSGSPSSRS EQHAPDGAGK GPAVAAPGPS ASASTPVSES TFLRLNTLDI NGDDAPSSQA 60
STSKKKKRGS RAAGPDKGNR GLRQFSMKVC EKVESKGRTT YNEVADELVA EFSDPNNNIE 120
APDPDNPNAE LQDQTRPHAT VEVEISEDMQ LVHFDFNRTE KAEPSADAPE SWRSTTSTGI 180
MPRRARETVQ NEGFLLLDST SKERTSRRVD RSAPLGVFPV DRLCMLAV
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| Functional Description ? help
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| Source |
Description |
| UniProt | Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. The complex DPB/E2FC restricts cell division and lateral root initiation and may function as a negative regulator of E2F-regulated genes. The interaction with SKP2A is controlled by auxin. {ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:16920782}. |
