PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc06036.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

MYB_related

Protein Properties

Length: 746aa MW: 80447.4 Da PI: 10.547

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc06036.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.5	1.3e-07	647	678	4	36
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS- CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRt 36 W t E++ll+ a k++G+g+W++++ +m+ R+ Zmw_sc06036.1.g00050.1.am.mk 647 WDTREELLLASALKRHGTGSWDSVSMEMQ-SRC 678 99***************************.998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00717	0.0034	643	701	IPR001005	SANT/Myb domain
Pfam	PF00249	3.2E-6	647	679	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	7.6E-4	647	679	IPR009057	Homeodomain-like
CDD	cd00167	7.52E-5	647	698	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:1904659	Biological Process	glucose transmembrane transport
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 746 aa Download sequence Send to blast
MLVRSLARPL TFPVKLLSPG RPSDAHVGGA WPACYELSVR RFRPPSCRLL PASLLLCKVN 60 DRGRHSVGQG GHWEGTVAGI VQLFQGSGWG DGRTTATVQP VAPRTRPISS LERPSGQAEW 120 VQRGLISLHP LGRKLRSFLA AQSPALCDYP AAETMKASIK FRDDDRPLMR AKVPIGVLGL 180 PFQSGLSAGG DPRELRFDLS TTFSSGPALR LSYRPNDPGL PFALTVRAGV GPLGSPGRAP 240 FVIAAEFNLL SSDPSSPAFF LRLKPRLGDF SLGHTIRSSA VPAPAPRTIV EASDGDGEGH 300 EVNYKAFSFS GSGIAAAGRS GGLGLGALLS GMRLTTRSVL PLWGRASLRF NWGLRVPPEL 360 QPGALADGHS KGARAPVSKM PLLVMSKISI EQSPRSDGVR KCARADASVA ATADGSDGSG 420 HGGGEEVAFS LVRRQLEELN VENVMLRRAV EDLRAEIRSS MDASPAAPRV DARRSPPPPQ 480 PQSHSFQAKP DRRGNGKEPA AETAKKASAV AVDDVGEELK KALEARRRSP RHEPFHGVLP 540 RRNQRETPDV DNDKKKPVRL HVHVSLRETD REHAVMYLNS VLHAVAVKPE SMKLYVKDRR 600 RYESPRPLKT RRRSGRAEES GMTPRSDDPD VAPGPVPVSA AAGGEIWDTR EELLLASALK 660 RHGTGSWDSV SMEMQSRCVS AADARFTPSG CRQRALLLHR RFAAGGGGDD DGDPDAAAAD 720 ALVEKLRKLR CDELRREVEQ HDLLIG

Sequence ? help Back to Top

Protein Sequence Length: 746 aa Download sequence Send to blast

MLVRSLARPL TFPVKLLSPG RPSDAHVGGA WPACYELSVR RFRPPSCRLL PASLLLCKVN  60
DRGRHSVGQG GHWEGTVAGI VQLFQGSGWG DGRTTATVQP VAPRTRPISS LERPSGQAEW  120
VQRGLISLHP LGRKLRSFLA AQSPALCDYP AAETMKASIK FRDDDRPLMR AKVPIGVLGL  180
PFQSGLSAGG DPRELRFDLS TTFSSGPALR LSYRPNDPGL PFALTVRAGV GPLGSPGRAP  240
FVIAAEFNLL SSDPSSPAFF LRLKPRLGDF SLGHTIRSSA VPAPAPRTIV EASDGDGEGH  300
EVNYKAFSFS GSGIAAAGRS GGLGLGALLS GMRLTTRSVL PLWGRASLRF NWGLRVPPEL  360
QPGALADGHS KGARAPVSKM PLLVMSKISI EQSPRSDGVR KCARADASVA ATADGSDGSG  420
HGGGEEVAFS LVRRQLEELN VENVMLRRAV EDLRAEIRSS MDASPAAPRV DARRSPPPPQ  480
PQSHSFQAKP DRRGNGKEPA AETAKKASAV AVDDVGEELK KALEARRRSP RHEPFHGVLP  540
RRNQRETPDV DNDKKKPVRL HVHVSLRETD REHAVMYLNS VLHAVAVKPE SMKLYVKDRR  600
RYESPRPLKT RRRSGRAEES GMTPRSDDPD VAPGPVPVSA AAGGEIWDTR EELLLASALK  660
RHGTGSWDSV SMEMQSRCVS AADARFTPSG CRQRALLLHR RFAAGGGGDD DGDPDAAAAD  720
ALVEKLRKLR CDELRREVEQ HDLLIG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025821757.1	1e-163	uncharacterized protein LOC112897624
TrEMBL	A0A2T8IHK7	1e-161	A0A2T8IHK7_9POAL; Uncharacterized protein
STRING	MLOC_80427.1	1e-152	(Hordeum vulgare)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4217	3	6