PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc06011.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 237aa MW: 25672.3 Da PI: 5.5389 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 50.6 | 3.9e-16 | 1 | 38 | 23 | 59 |
EEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 23 sYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +YYrC+s+ gCp++k+vers++dp++++itY++eHnh+ Zmw_sc06011.1.g00010.1.am.mk 1 GYYRCSSSkGCPARKQVERSRTDPSMLVITYNSEHNHP 38 5*****998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 19.852 | 1 | 40 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.8E-9 | 1 | 39 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.1E-13 | 1 | 38 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.2E-15 | 1 | 40 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.45E-13 | 2 | 40 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence Send to blast |
GYYRCSSSKG CPARKQVERS RTDPSMLVIT YNSEHNHPWP TQRNALAGST RSHHAKNNGN 60 NSSSKKNSSL QRPMVKAEWD QTAAAEATTT TTTSTSNSTP PATSVKEEEM MASEMEKAGV 120 QQHAGHHDTS AVTLDPGDLM QQMFNQSYRP MIPEGGHHVD DFFADLAELE SDPMSLIFSK 180 EYMETKPGGE PAAKEMAGPT KSLVDPLFNM LDWGATTAAV ATFAGSSSLE QQGESGL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025791328.1 | 7e-91 | probable WRKY transcription factor 14 | ||||
TrEMBL | A0A2T7FAW8 | 5e-90 | A0A2T7FAW8_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Ab02810.1.p | 3e-92 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2592 | 38 | 88 |