PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc05892.1.g00030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 138aa    MW: 14982.7 Da    PI: 9.5444
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc05892.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.93.6e-3171124255
                       G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   prlrWtpeLH rF++ave+LGG+++AtPk +l lm+vkgL++ hvkSHLQ+YR+
  Zmw_sc05892.1.g00030.1.sm.mk  71 PRLRWTPELHLRFLRAVERLGGQDRATPKLVLLLMNVKGLSIGHVKSHLQMYRS 124
                                   9****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.9E-2967125IPR009057Homeodomain-like
PROSITE profilePS5129412.95167127IPR017930Myb domain
SuperFamilySSF466891.08E-1568125IPR009057Homeodomain-like
TIGRFAMsTIGR015571.7E-2370126IPR006447Myb domain, plants
PfamPF002499.3E-1072123IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    Send to blast
MEEISSKSFA SSKNQGDPEE GDAAADAPHY CHEGSSSHSS SVDMEVAAGG DSSRKTAASS  60
SVRPYVRSKN PRLRWTPELH LRFLRAVERL GGQDRATPKL VLLLMNVKGL SIGHVKSHLQ  120
MYRSKKIDDS GQGKSTDS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-1872126357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-1872126357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-1872126357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-1872126357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00297DAPTransfer from AT2G38300Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021317375.16e-53putative Myb family transcription factor At1g14600
RefseqXP_021317376.16e-53putative Myb family transcription factor At1g14600
RefseqXP_021321607.13e-50uncharacterized protein LOC8064764
TrEMBLC5YQ158e-49C5YQ15_SORBI; Uncharacterized protein
STRINGSb08g000510.11e-50(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44083671