PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc05824.1.g00040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | Trihelix | ||||||||
Protein Properties | Length: 336aa MW: 36465.2 Da PI: 10.6271 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 44.8 | 3.3e-14 | 32 | 118 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtse 74 +W++ e+ aL+ a ++ +++rg+l++++W+ev++++ ++r r+ +qCk++ + l+k+yk++++++ Zmw_sc05824.1.g00040.1.am.mk 32 CWSDGETAALVSAWGSRYIEVNRGNLRQKQWQEVADAVnsrrgasARRRPPRTDVQCKNRVDTLKKKYKAERARNAP---- 108 7*****************************************999999999************************97.... PP trihelix 75 ssstcpyfdqle 86 s +++f++l+ Zmw_sc05824.1.g00040.1.am.mk 109 --SGWSFFQELH 118 ..4799***998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 1.7E-25 | 30 | 120 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence Send to blast |
MAMAAAAAAA ASGGGGCKLP PPNPNLPYRE DCWSDGETAA LVSAWGSRYI EVNRGNLRQK 60 QWQEVADAVN SRRGASARRR PPRTDVQCKN RVDTLKKKYK AERARNAPSG WSFFQELHHL 120 VGPTLDASAS KRPSPSPSPQ FALPFHPPPI RKPPSPSLSP SPPPPMALPL PNYRRGSPLP 180 AAALIQQEAA AAAAAMSDSG DSSDAGGKNN YNSQQSPLRS MSALSGHKEK RNRHETGSSS 240 DKAFRELARA IDAFAEMYER VENAKQNHAL EMERQRINFL KQLEVKRMEN FVDAHVKLMR 300 AKRTKKISGT AADGAAGVEL VATIAAQPFF STSTLH |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002440242.1 | 1e-146 | trihelix transcription factor ASIL2 | ||||
TrEMBL | A0A0A9IAS8 | 1e-150 | A0A0A9IAS8_ARUDO; Uncharacterized protein | ||||
STRING | Sb09g028350.1 | 1e-146 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2065 | 32 | 79 |