PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc05821.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 452aa MW: 50203.4 Da PI: 4.236

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc05821.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	66.6	7.2e-21	10	80	2	72
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgk 72 ppGfrF+Ptdeelv ++Lk+++++ + + i++vd+yk++P++Lp+ ++++++++w+fFs+ d+ky++g+ Zmw_sc05821.1.g00010.1.sm.mkhc 10 PPGFRFSPTDEELVLYFLKRRIASGRPTP--YIADVDVYKFHPSHLPErsALQTGDRQWFFFSRLDRKYPNGS 80 8*******************9999555..6**********94357888999***********987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	4.97E-22	7	81	IPR003441	NAC domain
PROSITE profile	PS51005	18.39	9	147	IPR003441	NAC domain
Pfam	PF02365	1.0E-9	10	74	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence Send to blast
MENPPPRRWP PGFRFSPTDE ELVLYFLKRR IASGRPTPYI ADVDVYKFHP SHLPERSALQ 60 TGDRQWFFFS RLDRKYPNGS PIEEQADREL TVGELEELLS EFGNDQDQGE APLDFSTPTS 120 QCQGWFNDAG NKLESVDTTT VSGALPVVEN CQHEDHQVWL DADKGEEVDA TGPIVNSGAV 180 VTAGCIGSEI LDGDLERLLL QIASDQGMFE PISDFSAPFP HHNLNQVGIG DFVSPGNPVG 240 TLPCIVQGSK DFDPRIGPSS QIPESNLTNV PFNAETKSAE GTSAQYSVSG SVNYNCQDAN 300 EEFLEINDFF DLDDVEQNVN CTANEHLISS TNVIFENLEY SDAPLLLPGH SDTAEMVAEN 360 QFVDFVNSGI QNQEYQYTTE VRTQSQIALN VQSHMKHNHV VLSSHTSGHS KLQMKKTLLF 420 TRQFSVSLAS SRSMLQVKDQ SLQLLRLQEV SD

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence Send to blast

MENPPPRRWP PGFRFSPTDE ELVLYFLKRR IASGRPTPYI ADVDVYKFHP SHLPERSALQ  60
TGDRQWFFFS RLDRKYPNGS PIEEQADREL TVGELEELLS EFGNDQDQGE APLDFSTPTS  120
QCQGWFNDAG NKLESVDTTT VSGALPVVEN CQHEDHQVWL DADKGEEVDA TGPIVNSGAV  180
VTAGCIGSEI LDGDLERLLL QIASDQGMFE PISDFSAPFP HHNLNQVGIG DFVSPGNPVG  240
TLPCIVQGSK DFDPRIGPSS QIPESNLTNV PFNAETKSAE GTSAQYSVSG SVNYNCQDAN  300
EEFLEINDFF DLDDVEQNVN CTANEHLISS TNVIFENLEY SDAPLLLPGH SDTAEMVAEN  360
QFVDFVNSGI QNQEYQYTTE VRTQSQIALN VQSHMKHNHV VLSSHTSGHS KLQMKKTLLF  420
TRQFSVSLAS SRSMLQVKDQ SLQLLRLQEV SD

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	4e-19	10	80	16	85	Stress-induced transcription factor NAC1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004957233.1	1e-121	uncharacterized protein LOC101780745 isoform X3
Refseq	XP_022679825.1	1e-121	uncharacterized protein LOC101780745 isoform X2
TrEMBL	A0A0A9K7P3	1e-132	A0A0A9K7P3_ARUDO; Uncharacterized protein
STRING	Si029088m	1e-121	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9128	28	40