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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zmw_sc05787.1.g00010.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
SRS |
| Protein Properties |
Length: 329aa MW: 33922.2 Da PI: 7.8467 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zmw_sc05787.1.g00010.1 | genome | ZGD | - |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 220.9 | 2.6e-68 | 98 | 264 | 2 | 154 |
DUF702 2 rsgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa......aeaaskrkr 76
+sg+++CqdCGnqakkdC+h+RCRtCCksrgfdC+th+kstWvpaa+rrerqq + s++++ ++ +++sk++r
Zmw_sc05787.1.g00010.1.sm.mk 98 GSGATTCQDCGNQAKKDCSHNRCRTCCKSRGFDCSTHIKSTWVPAARRRERQQLGGSGSASSSPATattaaaVASTSKKPR 178
57889**********************************************998765443332222234433344444444 PP
DUF702 77 elkskkqsalsstklssaeskkeletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiL 147
++q+++s+t++s+a+++++++t+s lP++v+++avf+cvrv+s+ddge+e+aYq+ v+i+GhvfkG+L
Zmw_sc05787.1.g00010.1.sm.mk 179 --LLSSQTTTSHTSTSNATTPRSFDTTSshqdasfrdsLPRQVRAPAVFKCVRVTSIDDGEDEYAYQAMVTINGHVFKGFL 257
..56999999***************99999*************************************************** PP
DUF702 148 ydqGlee 154
ydqG+++
Zmw_sc05787.1.g00010.1.sm.mk 258 YDQGVDD 264
****986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MVVVAPAASF LHTHHHHHHH DAAAAAAAAD PIFPLLSGGP SVLDPETARS GAPSSSAIQF 60
WQSPPPAGAN PNPSASSPFA YLKKPLPMLD TGGGGSSGSG ATTCQDCGNQ AKKDCSHNRC 120
RTCCKSRGFD CSTHIKSTWV PAARRRERQQ LGGSGSASSS PATATTAAAV ASTSKKPRLL 180
SSQTTTSHTS TSNATTPRSF DTTSSHQDAS FRDSLPRQVR APAVFKCVRV TSIDDGEDEY 240
AYQAMVTING HVFKGFLYDQ GVDDGRHGST SNDDSTAGVP NMSELHLGGG PGSNNAREGG 300
SSMLPTELYG GGVGGQNMMG GSGYGNTMS
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influence vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM). Modulates root growth. {ECO:0000269|PubMed:16740146, ECO:0000269|PubMed:18835563}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Expression repressed by LDL1 via histone H3 and H4 deacetylation. {ECO:0000269|PubMed:18835563}. |
