PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc05559.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 534aa MW: 57082.8 Da PI: 11.5438

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc05559.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.9	1.4e-10	406	448	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r+ +NRe+ArrsR RK+ ++ L+ +++L eN + Zmw_sc05559.1.g00050.1.am.mk 406 RRAKRMLSNRESARRSRMRKQRHLDDLTAQAAQLRRENAHVAT 448 89************************************87665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.4E-15	402	466	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.737	404	446	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.3E-10	406	454	No hit	No description
Pfam	PF00170	4.6E-9	406	447	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	8.5E-8	406	479	No hit	No description
CDD	cd14702	2.16E-19	407	455	No hit	No description
PROSITE pattern	PS00036	0	409	424	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence Send to blast
MAWLCSNDTV AWLLSPPVPA PGHALLCSTR QQQKPARHGA PFTKAPITGG ASGHQWRPSV 60 YKRNKEHEGG VDASTVVLLR IGPARADTPR ARARIYTITR FFFRRRPREG WNRNQRISPR 120 EYYGGGGLSA FRPRPGSARR PPLTPTAVTL LPSVPRRRIP GAPDEPIDSP TAPHPSIKPR 180 AFAAAPPPPP LSSLLPPLPA LSLSPSSAAG VGAPAVAPSQ AQLATTTTDR ATNRSPPRGW 240 LGPGRGRGRR LAGRPVAPIG SSLSMSPVIS EILLSGFMIN STLRRRTHLV QSFSVVFLYC 300 LSPSCLCICS SFSEPRNLVV VSVLKKETEQ QKGARISLLA SCGVVLRNNE GIKKPRFLLL 360 CSCKKGRFLA GTMASSSGSG SSGSLSAALV AAAGTDEELR TLMDQRRAKR MLSNRESARR 420 SRMRKQRHLD DLTAQAAQLR RENAHVATAL GLTTQGLLAV DAENAVLRTQ AAELAERLQS 480 LNGILACMNT NAAAAAGAVA VSLAAADPFL AFDFDGTTAF DDLMKSCPEM FPLC

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence Send to blast

MAWLCSNDTV AWLLSPPVPA PGHALLCSTR QQQKPARHGA PFTKAPITGG ASGHQWRPSV  60
YKRNKEHEGG VDASTVVLLR IGPARADTPR ARARIYTITR FFFRRRPREG WNRNQRISPR  120
EYYGGGGLSA FRPRPGSARR PPLTPTAVTL LPSVPRRRIP GAPDEPIDSP TAPHPSIKPR  180
AFAAAPPPPP LSSLLPPLPA LSLSPSSAAG VGAPAVAPSQ AQLATTTTDR ATNRSPPRGW  240
LGPGRGRGRR LAGRPVAPIG SSLSMSPVIS EILLSGFMIN STLRRRTHLV QSFSVVFLYC  300
LSPSCLCICS SFSEPRNLVV VSVLKKETEQ QKGARISLLA SCGVVLRNNE GIKKPRFLLL  360
CSCKKGRFLA GTMASSSGSG SSGSLSAALV AAAGTDEELR TLMDQRRAKR MLSNRESARR  420
SRMRKQRHLD DLTAQAAQLR RENAHVATAL GLTTQGLLAV DAENAVLRTQ AAELAERLQS  480
LNGILACMNT NAAAAAGAVA VSLAAADPFL AFDFDGTTAF DDLMKSCPEM FPLC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	418	425	RRSRMRKQ

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4459	33	67