PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc05555.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 541aa MW: 60458.5 Da PI: 9.5191

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc05555.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.2	6.9e-32	167	220	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Zmw_sc05555.1.g00050.1.am.mk 167 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 220 9****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.9E-28	165	220	IPR009057	Homeodomain-like
SuperFamily	SSF46689	4.66E-15	165	221	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.7E-23	167	221	IPR006447	Myb domain, plants
Pfam	PF00249	3.3E-7	168	219	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence Send to blast
MELFPAHPDL QLQISPPPTT KPMDLGFWKR ALDSTPVATS TAETLATATT PPPSMSIASY 60 APTGVGVGGF HQAAAAGAGH HLGALPFLHH TQPVLLADAS GLRDLATMRP IRGIPVYNTS 120 QPLPFLQSHQ HHHQHCYDAI GHAAGPRLPK AALRLAGAPV KRGARAPRMR WTTSLHARFV 180 HAVELLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT IKTTDHKPAS ASSYGTYRGA 240 WFHDKSSTRD ATPGDIKSLE LVSSMRIVGN VLGPSIDQYS DAIIFVLLTP ISLLPDQHFS 300 RTCVHEEDLK MTDMIPRTID TSIDEKRRAG YPVAQRGMCR CSLLACFFMV FVVHLTMHID 360 LAINWGNTHP PMLLLWPPCT DGWMHPRSCL QQPPVGEVMR AWPRPAASAR PLPSSPAMHA 420 LCEYVYRGKG RDRATCSLFR CQHLRFEFAL TLKQNLLNLV VRGATRHCRC MRSFLDDGHW 480 LENPRPEKEG FVLRAERERE RERERERGHR ASQPRGEMND EALHYAMIGG RPEEKQRRGR 540 D

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence Send to blast

MELFPAHPDL QLQISPPPTT KPMDLGFWKR ALDSTPVATS TAETLATATT PPPSMSIASY  60
APTGVGVGGF HQAAAAGAGH HLGALPFLHH TQPVLLADAS GLRDLATMRP IRGIPVYNTS  120
QPLPFLQSHQ HHHQHCYDAI GHAAGPRLPK AALRLAGAPV KRGARAPRMR WTTSLHARFV  180
HAVELLGGHE RATPKSVLEL MDVKDLTLAH VKSHLQMYRT IKTTDHKPAS ASSYGTYRGA  240
WFHDKSSTRD ATPGDIKSLE LVSSMRIVGN VLGPSIDQYS DAIIFVLLTP ISLLPDQHFS  300
RTCVHEEDLK MTDMIPRTID TSIDEKRRAG YPVAQRGMCR CSLLACFFMV FVVHLTMHID  360
LAINWGNTHP PMLLLWPPCT DGWMHPRSCL QQPPVGEVMR AWPRPAASAR PLPSSPAMHA  420
LCEYVYRGKG RDRATCSLFR CQHLRFEFAL TLKQNLLNLV VRGATRHCRC MRSFLDDGHW  480
LENPRPEKEG FVLRAERERE RERERERGHR ASQPRGEMND EALHYAMIGG RPEEKQRRGR  540
D

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	8e-16	168	222	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	8e-16	168	222	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	8e-16	168	222	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	8e-16	168	222	3	57	Protein PHOSPHATE STARVATION RESPONSE 1

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	496	506	RERERERERER

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1E5VN24	1e-110	A0A1E5VN24_9POAL; Putative transcription factor KAN2

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9438	34	45