PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc05479.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 487aa MW: 52318.4 Da PI: 11.3022

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc05479.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	31.9	2.9e-10	89	112	2	25
G2-like 2 prlrWtpeLHerFveaveqLGGse 25 pr+rWt+ LH++Fv+ave LGG+e Zmw_sc05479.1.g00030.1.am.mk 89 PRMRWTTALHAHFVQAVELLGGHE 112 9*********************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.1E-7	86	113	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence Send to blast
MSSTTVTGAT PDLSLHISPP SPADGGGETP EPSSTLRLGL DTAAKTVVDA AQHGLLVQQR 60 LHQPSQTAHG FKKSSGAGAR GGKRCSRAPR MRWTTALHAH FVQAVELLGG HESHGQAREM 120 GFLMGRGDAP EMDGLFDGFN CNVVNTTAMF SSNSSTSRRS QSSPAEHHHS AAWIQALLVE 180 HQESGNDDEE PMRHHLPASP ACRLQLPHHH RHRAPQPDRI LMMEQRRQMQ KGGAQDHHGD 240 GAVVHDLGEA AGPGPAVSQQ NRLPTPPPPP PPLHHHERAE MVVVVSSNTS SGSDTASSSD 300 WLRQTRYGDI SWTVEAPPPP SLEMSLGRQG WQMEPSPSSK EQTLLKCLRR PAGPTIFSAL 360 LTAKARAPDP GTGNQPRGTR QRSTTTIRAP SSWELAVEAG PIRRRRLDEA NPRAGPGRVD 420 PRARRRAHST LATGASRRTA AGPSVPLPAA RTGNEARVDL AGRPAGGRAN WLLSWRRRVG 480 SSARSTV

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence Send to blast

MSSTTVTGAT PDLSLHISPP SPADGGGETP EPSSTLRLGL DTAAKTVVDA AQHGLLVQQR  60
LHQPSQTAHG FKKSSGAGAR GGKRCSRAPR MRWTTALHAH FVQAVELLGG HESHGQAREM  120
GFLMGRGDAP EMDGLFDGFN CNVVNTTAMF SSNSSTSRRS QSSPAEHHHS AAWIQALLVE  180
HQESGNDDEE PMRHHLPASP ACRLQLPHHH RHRAPQPDRI LMMEQRRQMQ KGGAQDHHGD  240
GAVVHDLGEA AGPGPAVSQQ NRLPTPPPPP PPLHHHERAE MVVVVSSNTS SGSDTASSSD  300
WLRQTRYGDI SWTVEAPPPP SLEMSLGRQG WQMEPSPSSK EQTLLKCLRR PAGPTIFSAL  360
LTAKARAPDP GTGNQPRGTR QRSTTTIRAP SSWELAVEAG PIRRRRLDEA NPRAGPGRVD  420
PRARRRAHST LATGASRRTA AGPSVPLPAA RTGNEARVDL AGRPAGGRAN WLLSWRRRVG  480
SSARSTV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025805465.1	1e-43	uncharacterized protein LOC112884302
TrEMBL	A0A0A9GQA6	6e-65	A0A0A9GQA6_ARUDO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP34560	2	2