PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc05348.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 377aa MW: 40685.5 Da PI: 6.841

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc05348.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	39.4	1.3e-12	264	293	1	30
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPk 30 k+r+rWt++LHerFv++v++LGG+++ P+ Zmw_sc05348.1.g00010.1.sm.mkhc 264 KTRIRWTQDLHERFVDCVNKLGGADRVDPS 293 68************************9886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.9E-9	263	299	IPR009057	Homeodomain-like
Pfam	PF14379	3.8E-7	297	321	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence Send to blast
MQSERENSQE VSVLPAAYSQ VFRDPVITAM NTKKIKLHDH HSYGSQMCDP HLFQATAAGF 60 NFHQGFVSSG HSVPQQNGGG GGNWPQEEYS SQTPRSALAT QGVCVGSDPA SFFAAENLIG 120 MARFDCALPP MAGLRTAPFR RAPEADQLHR SVDPPLLRDD SVRTYYVPPQ QRDAATAHPA 180 LELPLQQQGL FGHASAARLL GGEPQNHPFS PHVVASTLLP AMAGPSVTRP MENALSRSCS 240 MGAPTTRTGN MVTATTPGQG APSKTRIRWT QDLHERFVDC VNKLGGADRV DPSGTHIQRN 300 LQLKIEEQGK KLQKMFEEQL KASKSVLEPP RENRQDAGAA SAVLGEDDDA FDDVQLLSVA 360 SSGFNDAGFP SKIKLPS

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence Send to blast

MQSERENSQE VSVLPAAYSQ VFRDPVITAM NTKKIKLHDH HSYGSQMCDP HLFQATAAGF  60
NFHQGFVSSG HSVPQQNGGG GGNWPQEEYS SQTPRSALAT QGVCVGSDPA SFFAAENLIG  120
MARFDCALPP MAGLRTAPFR RAPEADQLHR SVDPPLLRDD SVRTYYVPPQ QRDAATAHPA  180
LELPLQQQGL FGHASAARLL GGEPQNHPFS PHVVASTLLP AMAGPSVTRP MENALSRSCS  240
MGAPTTRTGN MVTATTPGQG APSKTRIRWT QDLHERFVDC VNKLGGADRV DPSGTHIQRN  300
LQLKIEEQGK KLQKMFEEQL KASKSVLEPP RENRQDAGAA SAVLGEDDDA FDDVQLLSVA  360
SSGFNDAGFP SKIKLPS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004960202.1	1e-123	uncharacterized protein LOC101784276
Refseq	XP_004960204.1	1e-123	uncharacterized protein LOC101784276
TrEMBL	K3Z6D0	1e-121	K3Z6D0_SETIT; Uncharacterized protein
STRING	Si022099m	1e-122	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6933	37	51