PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc05344.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 433aa MW: 46800.5 Da PI: 6.3424 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 33.6 | 8.9e-11 | 266 | 293 | 1 | 28 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAt 28 k+r+rWt++LHe Fv++v++LGG++ t Zmw_sc05344.1.g00010.1.sm.mkhc 266 KTRIRWTQDLHELFVDCVNKLGGADSPT 293 68*********************99765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 4.6E-8 | 265 | 294 | IPR009057 | Homeodomain-like |
Pfam | PF14379 | 5.5E-20 | 332 | 377 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 433 aa Download sequence Send to blast |
MQSERENCQE VSVLPAAYSQ VFRDPVITAM NTKKIKLHDH HSYGSQMCDP HLFQATAAGF 60 NFHQGFVSSG HSVPQQNGGG GGNWPQEEYI SQTPRSALAT QGVCVGSDPA SFFAAENLIG 120 MARFDCALPP MAGLRTAPFG RAPEADQLHR SVDPPLLRDD SVRTYYVPPQ QRDAATAHPA 180 LELPLQQQGL FGHASAARLL GGEPQNHPFS PHVAASTLLP AMAGPSVTSP MDRENALSRS 240 CSTGAPTTRT GNMVTATTPG QGAPSKTRIR WTQDLHELFV DCVNKLGGAD SPTVQFLADT 300 HMLAFCCPIA GKHEKRAAGN DVLNLDPNTG EQITQALRVQ LDVQRRLHEQ LEIQRNLQLK 360 IEEQGKKLQK MFEEQLKASK SVLEPPRENR QDAGAASAVL GEDDDAFDDV QLLSVASSGF 420 NDAGFPSKIK LPS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004960202.1 | 1e-166 | uncharacterized protein LOC101784276 | ||||
Refseq | XP_004960204.1 | 1e-166 | uncharacterized protein LOC101784276 | ||||
TrEMBL | K3Z6D0 | 1e-165 | K3Z6D0_SETIT; Uncharacterized protein | ||||
STRING | Si022099m | 1e-166 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6933 | 37 | 51 |