PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc05197.1.g00050.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Nin-like
Protein Properties Length: 281aa    MW: 30593 Da    PI: 10.1994
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc05197.1.g00050.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK37.93.4e-123089248
                        RWP-RK  2 ekeisledlskyFslpikdAAkeLg.............vclTvLKriCRqyGIkRWPhRk 48
                                  ek++sle+l++yFs+ +kdAA++Lg             +    L  iCRq+GI+ W +R+
  Zmw_sc05197.1.g00050.1.sm.mk 30 EKTVSLEELQRYFSGRMKDAARSLGamlmaetswikspLARQRLSAICRQLGISKWLFRQ 89
                                  799*****************************************************9997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151911.01317113IPR003035RWP-RK domain
PfamPF020428.1E-103288IPR003035RWP-RK domain
SuperFamilySSF542771.31E-18183252No hitNo description
SMARTSM006661.9E-17185278IPR000270PB1 domain
PROSITE profilePS5174516.66185260IPR000270PB1 domain
PfamPF005641.2E-13186260IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2402.6E-21186252No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MANQRKVKIR NHKLAGGRGG GGRRWRKENE KTVSLEELQR YFSGRMKDAA RSLGAMLMAE  60
TSWIKSPLAR QRLSAICRQL GISKWLFRQN AKANDSLGKV KRIFESVPYS QQSMAAPAAS  120
HQAPAPAPAT VHDPPAALLP YLSSAVEVTS SQGSCQEPPP PPPPLPPRMS TAIRKKPFHA  180
GDTELVTVKA SYRGDIVRFR GPSSAGVEAV MGEVAKRLGL ETDAFDVKYL DDDNEWVLLS  240
CDTDFQECLQ VVPALSTASS SSGSGVAQPL VRLMVQEVLR N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11521GGRGGGG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025823617.14e-79protein NLP3-like
TrEMBLA0A2S3GLE71e-77A0A2S3GLE7_9POAL; Uncharacterized protein
STRINGPavir.Aa03213.1.p1e-79(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62692939