PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc05129.1.g00060.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

BES1

Protein Properties

Length: 400aa MW: 41069.7 Da PI: 9.0195

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc05129.1.g00060.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	149.1	3.6e-46	21	129	2	117
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaa 82 ++ r tw+ErEnn++RERrRR i+aki++GLRa Gny+lpk++DnneVl+ALc+eAGw+v +DGttyr+ + + Zmw_sc05129.1.g00060.1.am.mk 21 SAPRVLTWRERENNRLRERRRRMITAKIFTGLRAFGNYRLPKHCDNNEVLRALCNEAGWTVLPDGTTYRQAPVVAVDHTGI 101 677899***************************************************************765555555555 PP DUF822 83 gssasaspesslqsslkssalaspvesysaspkss 117 sa+as ss l s + sy++s ++s Zmw_sc05129.1.g00060.1.am.mk 102 FGSATASAYSSFP-------LMSSLLSYNPSSATS 129 6677777777766.......333344444443333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	5.5E-44	24	131	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence Send to blast
MKMTGEGAGS VAGGSRAGGG SAPRVLTWRE RENNRLRERR RRMITAKIFT GLRAFGNYRL 60 PKHCDNNEVL RALCNEAGWT VLPDGTTYRQ APVVAVDHTG IFGSATASAY SSFPLMSSLL 120 SYNPSSATSS SLITLGGGNS SNNFFFTGGA GSSGGGAAAG SYNFTTLLKG MSGPAASPYP 180 SYSAANLTAP VAPPASASPQ LSLLLDKMAR WAKNSAAAGS SAQVPPPWGN GASRSRYAPP 240 SFPTANDPVG RLPLPDPATW LPGFQAPSAG GQAPANSYGA PLGAYMGTGA VAGPSRLGAP 300 GLNICPRFPA FPHGGAVVTA PGNVNTAEAV STEISLAVGS SAPGDVKPAE DVSTEISLAL 360 GDAWANFPAW NEEVSNEYNE EELKLTLGNA SSRTDRTWLN

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence Send to blast

MKMTGEGAGS VAGGSRAGGG SAPRVLTWRE RENNRLRERR RRMITAKIFT GLRAFGNYRL  60
PKHCDNNEVL RALCNEAGWT VLPDGTTYRQ APVVAVDHTG IFGSATASAY SSFPLMSSLL  120
SYNPSSATSS SLITLGGGNS SNNFFFTGGA GSSGGGAAAG SYNFTTLLKG MSGPAASPYP  180
SYSAANLTAP VAPPASASPQ LSLLLDKMAR WAKNSAAAGS SAQVPPPWGN GASRSRYAPP  240
SFPTANDPVG RLPLPDPATW LPGFQAPSAG GQAPANSYGA PLGAYMGTGA VAGPSRLGAP  300
GLNICPRFPA FPHGGAVVTA PGNVNTAEAV STEISLAVGS SAPGDVKPAE DVSTEISLAL  360
GDAWANFPAW NEEVSNEYNE EELKLTLGNA SSRTDRTWLN

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	2e-16	44	90	392	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	2e-16	44	90	392	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	2e-16	44	90	392	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	2e-16	44	90	392	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP24462	4	6