PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc05087.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 245aa MW: 26642.5 Da PI: 6.0266 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 68.5 | 9.7e-22 | 27 | 90 | 3 | 58 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTE.....EEEEEES--SS CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkv.....veitYegeHnh 58 Dgy+WrKYGqK+++g+ +prsYYrC+ + +Cp+k+ v+r+++ ++ +++Y eH++ Zmw_sc05087.1.g00010.1.sm.mk 27 DGYQWRKYGQKQIEGAMYPRSYYRCARSaeqRCPAKRTVQRNDDGDDIsgslkYTVVYMAEHTC 90 9************************9877789**********9655542222357999999998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 6.0E-22 | 11 | 91 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.32E-20 | 20 | 91 | IPR003657 | WRKY domain |
SMART | SM00774 | 9.2E-26 | 25 | 92 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 17.66 | 27 | 68 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.0E-23 | 27 | 90 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MSDGSNASCR KTKQASICHV TSVPDFDGYQ WRKYGQKQIE GAMYPRSYYR CARSAEQRCP 60 AKRTVQRNDD GDDISGSLKY TVVYMAEHTC AADDSTEKPR RPKKSCGTKN IAAPAAFLPP 120 EAEARYDAAA LVDPAAAADS SVTRPASTTV TITGTAESPA ISDVTWSGTA NNNELHDDLL 180 RDGLFAVDHR CAEMSSLLVH KDMDDFTGPI RSPVHIASGD WTVDHLHLLH LVNEPISDSS 240 AGFSF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 4e-13 | 27 | 90 | 10 | 68 | OsWRKY45 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0A9HC42 | 3e-65 | A0A0A9HC42_ARUDO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5760 | 30 | 58 |