PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04958.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 574aa MW: 61438.4 Da PI: 6.6518

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04958.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.4	6.3e-13	119	180	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e e+kr r+ +NRe+A sRqRKk+++eeLe vk+++a +L +++ + e +lk + Zmw_sc04958.1.g00010.1.sm.mkhc 119 EDEVKRRARLVRNRESAHLSRQRKKQYVEELEGTVKAMQATIADLSARISCVTAENVALKEQ 180 6789******************************************9999988888888776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.8E-13	119	183	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	7.5E-12	119	180	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.553	121	181	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	8.13E-13	122	181	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.4E-15	123	181	No hit	No description
CDD	cd14704	1.58E-19	124	174	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence Send to blast
MSEPSLLAPV AQDPFADLSF PELQVPPVDD TFAFEDFNLD DLDLDVDFDL DLFAADGQLS 60 QPPPLATSSS SAPSPERGSS SSSAGGDGGL RNEDSSESSS RSATGKDSCG KGKGDGAEED 120 EVKRRARLVR NRESAHLSRQ RKKQYVEELE GTVKAMQATI ADLSARISCV TAENVALKEQ 180 LGGAAGGAPP PLPMYPAVYP LPMPWVHPAY AMRGSQVPLV PIPRLKFQQP TPASEPPAKK 240 PRKTKKVASV SLLGLLCLVM VCGCLIPAVN RMYGTIDTGG GFAFGPSHHH GRVLAVEGPS 300 NSVLEGTDPK PPKNASETLP ALLYLPRNGK HVKINGNLVI KSIVASEEAS SRMSRYDEKS 360 HRSQRKEETS LAIPGNMAPL EAGEAVEPTA EVKNKLMALA PGDANMYRED DGLIPQWFSE 420 AMSGPMLSSG MCTEVFQFDV SPSSTHANGI VPVSSNSMAS SSQNFTENLP SGQPQKVKNR 480 RILYSGAIPL KGSTSNDTEH LKAHPKNETY ARSKPVPSMV VSILADPREA GDRSSDGRIS 540 SKSLSRIFVV VLIDSVKYVT YSCVLPFKNH SPHL

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence Send to blast

MSEPSLLAPV AQDPFADLSF PELQVPPVDD TFAFEDFNLD DLDLDVDFDL DLFAADGQLS  60
QPPPLATSSS SAPSPERGSS SSSAGGDGGL RNEDSSESSS RSATGKDSCG KGKGDGAEED  120
EVKRRARLVR NRESAHLSRQ RKKQYVEELE GTVKAMQATI ADLSARISCV TAENVALKEQ  180
LGGAAGGAPP PLPMYPAVYP LPMPWVHPAY AMRGSQVPLV PIPRLKFQQP TPASEPPAKK  240
PRKTKKVASV SLLGLLCLVM VCGCLIPAVN RMYGTIDTGG GFAFGPSHHH GRVLAVEGPS  300
NSVLEGTDPK PPKNASETLP ALLYLPRNGK HVKINGNLVI KSIVASEEAS SRMSRYDEKS  360
HRSQRKEETS LAIPGNMAPL EAGEAVEPTA EVKNKLMALA PGDANMYRED DGLIPQWFSE  420
AMSGPMLSSG MCTEVFQFDV SPSSTHANGI VPVSSNSMAS SSQNFTENLP SGQPQKVKNR  480
RILYSGAIPL KGSTSNDTEH LKAHPKNETY ARSKPVPSMV VSILADPREA GDRSSDGRIS  540
SKSLSRIFVV VLIDSVKYVT YSCVLPFKNH SPHL

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269\|PubMed:22050533}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000305\|PubMed:22050533}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025800125.1	0.0	bZIP transcription factor 60-like
Swissprot	Q8LIB3	0.0	BZP60_ORYSJ; bZIP transcription factor 60
TrEMBL	A0A0K0K9Y4	0.0	A0A0K0K9Y4_ELECO; BZIP transcription factor b
STRING	Sb02g041070.1	0.0	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP11179	30	35

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Oono Y, et al. Analysis of ER stress in developing rice endosperm accumulating beta-amyloid peptide. Plant Biotechnol. J., 2010. 8(6): p. 691-718 [PMID:20331531] Hu J, et al. The Bphi008a gene interacts with the ethylene pathway and transcriptionally regulates MAPK genes in the response of rice to brown planthopper feeding. Plant Physiol., 2011. 156(2): p. 856-72 [PMID:21487048] Takahashi H,Kawakatsu T,Wakasa Y,Hayashi S,Takaiwa F A rice transmembrane bZIP transcription factor, OsbZIP39, regulates the endoplasmic reticulum stress response. Plant Cell Physiol., 2012. 53(1): p. 144-53 [PMID:22084314] Ohta M, et al. Analysis of rice ER-resident J-proteins reveals diversity and functional differentiation of the ER-resident Hsp70 system in plants. J. Exp. Bot., 2013. 64(18): p. 5429-41 [PMID:24153418] Cheng Q, et al. An alternatively spliced heat shock transcription factor, OsHSFA2dI, functions in the heat stress-induced unfolded protein response in rice. Plant Biol (Stuttg), 2015. 17(2): p. 419-29 [PMID:25255693]