PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04753.1.g00080.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Nin-like

Protein Properties

Length: 829aa MW: 89569.9 Da PI: 5.3339

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04753.1.g00080.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	82.1	5.5e-26	591	640	2	51
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 ek++sle+l++yF + +kdAA++Lgvc+T++KriCRq+GI+RWP+R+i++ Zmw_sc04753.1.g00080.1.am.mk 591 EKTVSLEELQRYFPGRMKDAARSLGVCPTTMKRICRQHGISRWPFRQIAK 640 799*********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.836	576	661	IPR003035	RWP-RK domain
Pfam	PF02042	6.5E-23	593	640	IPR003035	RWP-RK domain
SuperFamily	SSF54277	8.5E-19	719	791	No hit	No description
PROSITE profile	PS51745	17.57	724	817	IPR000270	PB1 domain
SMART	SM00666	4.7E-18	724	817	IPR000270	PB1 domain
CDD	cd06407	7.76E-30	725	792	No hit	No description
Pfam	PF00564	1.4E-13	725	794	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	5.7E-21	725	791	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 829 aa Download sequence Send to blast
MECAEKMECD AIPTELKETA TYLLTALPGV DGLAQTKSIC KLNILRRPMA ARHLLRSMTL 60 DNKTSGGPES LTCGLRLDSA ASGRSRRVDL LHAMERGADM DTVLRSFDHL LDRDGARGSS 120 AGWWRYSIRC GSDDRSRSGG SAAGKVRDTV DGCAAPFVLA PPQCHQLFQY RTVSLTHAFP 180 VGGPGAAASG ERGMPGRVFD AGTPEWTPNV QYYGTGEYAR ISYALIYDIQ AALALPILEP 240 DTGACLAVLE LVMTSPRLRF ADEVDKLCKA LQAVELRGSD ICCPVAEVCS DEAAEQAMSE 300 VSDVLTTVCE AHQLPLVQAW VRCKRCNSTS MEHASLTTAG APFHLSGDEG VRGFREACVE 360 QHLREGRGGL VEGAATARGP RFCADVTKYS MDEYPLAHHA RFSGLAGCLA VCVELRRDAG 420 GEGGREECVL EFFLPPDCSD GQAQKAAVEA VAATIRECFG NGDLKAIALC GSQDLAFEIV 480 ADDECVLRPD RAIMADAPDP ELQLENHGRY APDHTIMADT PDPELQLDNH GGYVRDSDDE 540 DVHLSAAIRD ADVDAPEMKN DEQKEGEDPE PQDGNSRTRR KKKKVGKRKN EKTVSLEELQ 600 RYFPGRMKDA ARSLGVCPTT MKRICRQHGI SRWPFRQIAK ANNSHDKVKR IFESVQYSPQ 660 PMAAPAASQQ APALATAHGP PAALPCLSSA HGVASSQGSC QEPPPPRKRS ITRKPFHAGD 720 TEGLVTVKAS YRGDIVRFRV PSFAGVEAVK GEVAKRLGLE MDAFDLKYLD DDNEWVLLSC 780 DADFQECLEV FPALSTASSS SGSGAAQPVV RLMVQEVADN HGSSCASSD

Sequence ? help Back to Top

Protein Sequence Length: 829 aa Download sequence Send to blast

MECAEKMECD AIPTELKETA TYLLTALPGV DGLAQTKSIC KLNILRRPMA ARHLLRSMTL  60
DNKTSGGPES LTCGLRLDSA ASGRSRRVDL LHAMERGADM DTVLRSFDHL LDRDGARGSS  120
AGWWRYSIRC GSDDRSRSGG SAAGKVRDTV DGCAAPFVLA PPQCHQLFQY RTVSLTHAFP  180
VGGPGAAASG ERGMPGRVFD AGTPEWTPNV QYYGTGEYAR ISYALIYDIQ AALALPILEP  240
DTGACLAVLE LVMTSPRLRF ADEVDKLCKA LQAVELRGSD ICCPVAEVCS DEAAEQAMSE  300
VSDVLTTVCE AHQLPLVQAW VRCKRCNSTS MEHASLTTAG APFHLSGDEG VRGFREACVE  360
QHLREGRGGL VEGAATARGP RFCADVTKYS MDEYPLAHHA RFSGLAGCLA VCVELRRDAG  420
GEGGREECVL EFFLPPDCSD GQAQKAAVEA VAATIRECFG NGDLKAIALC GSQDLAFEIV  480
ADDECVLRPD RAIMADAPDP ELQLENHGRY APDHTIMADT PDPELQLDNH GGYVRDSDDE  540
DVHLSAAIRD ADVDAPEMKN DEQKEGEDPE PQDGNSRTRR KKKKVGKRKN EKTVSLEELQ  600
RYFPGRMKDA ARSLGVCPTT MKRICRQHGI SRWPFRQIAK ANNSHDKVKR IFESVQYSPQ  660
PMAAPAASQQ APALATAHGP PAALPCLSSA HGVASSQGSC QEPPPPRKRS ITRKPFHAGD  720
TEGLVTVKAS YRGDIVRFRV PSFAGVEAVK GEVAKRLGLE MDAFDLKYLD DDNEWVLLSC  780
DADFQECLEV FPALSTASSS SGSGAAQPVV RLMVQEVADN HGSSCASSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	578	583	RRKKKK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025823617.1	0.0	protein NLP3-like
TrEMBL	A0A3L6QJT0	0.0	A0A3L6QJT0_PANMI; Uncharacterized protein
STRING	Si016430m	0.0	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6269	29	39