PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04615.1.g00090.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 377aa    MW: 40450.2 Da    PI: 7.3069
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04615.1.g00090.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like93.31.9e-29238293156
                         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                                     k r++W+peLH +Fv a+++L G+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  Zmw_sc04615.1.g00090.1.sm.mkhc 238 KSRRCWSPELHLQFVAALNKLDGPQVATPKQIRELMKVEGLTNDEVKSHLQKYRLH 293
                                     68****************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.7E-27235296IPR009057Homeodomain-like
PROSITE profilePS5129410.298235295IPR017930Myb domain
SuperFamilySSF466895.47E-16236296IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-24238293IPR006447Myb domain, plants
PfamPF002495.5E-6240291IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MGLDVGEIGM GADLSLDLRH FASKAMKQTG SAQASDMDAY IRRLEEERGK IEVFRRELPI  60
CARLLADAID VMKEEAEKEK KNDHKEEEED GAAGDKSKWM STAQLWTSGS GREAAEPEKQ  120
ESDKGRSSSE QKSFSGGALT LFNAVASGAP SSRQRPRLRN NDDKAADVGM PDLSLLSPPP  180
ITSVPAAAAD ESRRLVVGLA TAAARASGMV PSAGGPTLFL PPQVKQTTPQ QQQQQSRKSR  240
RCWSPELHLQ FVAALNKLDG PQVATPKQIR ELMKVEGLTN DEVKSHLQKY RLHTRRTPSG  300
PAVVSQPIVL VGGLWIPHQE HSQSGSQSQS SGSPQGPLHF SPASGVATAS CEEEASAAGP  360
RSATAGNDQQ GILHRQS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A4e-13238291154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-13238291154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-13238291154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-13238291154Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002459272.21e-131transcription factor HHO2
RefseqXP_025804519.11e-131transcription factor NIGTH1-like
TrEMBLA0A0A9H2111e-133A0A0A9H211_ARUDO; Uncharacterized protein
STRINGSb02g001600.11e-131(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP181737107