PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04583.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 362aa MW: 38786.5 Da PI: 9.2718

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04583.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.6	5e-32	236	291	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k r++W+peLH++Fv a++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Zmw_sc04583.1.g00020.1.sm.mkhc 236 KSRRCWSPELHRQFVAALNQLGGPQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 291 68****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.764	233	293	IPR017930	Myb domain
SuperFamily	SSF46689	5.38E-17	234	294	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	6.0E-29	234	294	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	9.0E-26	236	291	IPR006447	Myb domain, plants
Pfam	PF00249	3.8E-7	238	289	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence Send to blast
MGLDVGEIGM GADLSLDLRH FAARAMRQSK NAPPASDMDA YIRRLEEERG KIEVFRRELP 60 ICARLLADVI DVMKEEAEKK KRNDRKEDEA GDKSKWMSTA QLWTGGSGRD AAETEKQDKG 120 TSSSSSEPKS CGGAFTPFKA VGSGAPAFGR PCLRNDDKAA GVGTPPDLSP LSPPAVKSVP 180 AGAADKSNRQ VLGFAQAAAR AAAMVPSGPA LSGLQRQPQQ TTPPPQQQQQ QQQARKSRRC 240 WSPELHRQFV AALNQLGGPQ VATPKQIREL MKVDGLTNDE VKSHLQKYRL HNRRTPAGST 300 VVSQPIVLVG GLWIPQEQSS SQSGSPQGPL HFSTSAGVAV SSTAATASCE EEDGRSESDG 360 WK

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence Send to blast

MGLDVGEIGM GADLSLDLRH FAARAMRQSK NAPPASDMDA YIRRLEEERG KIEVFRRELP  60
ICARLLADVI DVMKEEAEKK KRNDRKEDEA GDKSKWMSTA QLWTGGSGRD AAETEKQDKG  120
TSSSSSEPKS CGGAFTPFKA VGSGAPAFGR PCLRNDDKAA GVGTPPDLSP LSPPAVKSVP  180
AGAADKSNRQ VLGFAQAAAR AAAMVPSGPA LSGLQRQPQQ TTPPPQQQQQ QQQARKSRRC  240
WSPELHRQFV AALNQLGGPQ VATPKQIREL MKVDGLTNDE VKSHLQKYRL HNRRTPAGST  300
VVSQPIVLVG GLWIPQEQSS SQSGSPQGPL HFSTSAGVAV SSTAATASCE EEDGRSESDG  360
WK

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	2e-14	236	289	1	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-14	236	289	1	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-14	236	289	1	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-14	236	289	1	54	Protein PHOSPHATE STARVATION RESPONSE 1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002459272.2	1e-158	transcription factor HHO2
TrEMBL	A0A0C4MLG7	1e-158	A0A0C4MLG7_9POAL; Uncharacterized protein
STRING	Sb02g001600.1	1e-158	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1817	37	107