PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04553.1.g00010.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WOX
Protein Properties Length: 418aa    MW: 45013.5 Da    PI: 8.1641
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04553.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.27.7e-201675357
                                  --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                      Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                                  +R+++t+eql +Lee+++   r+p+a+++++++++l    +++ ++V++WFqN++a++++
  Zmw_sc04553.1.g00010.1.am.mk 16 TRWCPTPEQLMILEEMYRGgLRTPNASQIQQITAHLaaygRIEGKNVFYWFQNHKARDRQ 75
                                  7*****************99*************************************996 PP
2Wus_type_Homeobox117.46.6e-381676464
             Wus_type_Homeobox  4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                                  tRW+PtpeQ++iLee+y+ GlrtPn+++iq+ita+L++yG+ie+kNVfyWFQN+kaR+rqk
  Zmw_sc04553.1.g00010.1.am.mk 16 TRWCPTPEQLMILEEMYRGGLRTPNASQIQQITAHLAAYGRIEGKNVFYWFQNHKARDRQK 76
                                  8***********************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003893.5E-41380IPR001356Homeobox domain
SuperFamilySSF466892.69E-101479IPR009057Homeodomain-like
PfamPF000461.6E-171675IPR001356Homeobox domain
CDDcd000867.44E-51676No hitNo description
Gene3DG3DSA:1.10.10.601.6E-61775IPR009057Homeodomain-like
PROSITE profilePS500719.7662176IPR001356Homeobox domain
PfamPF150543.9E-21368411IPR027854Protein of unknown function DUF4535
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008283Biological Processcell proliferation
GO:0009908Biological Processflower development
GO:0009943Biological Processadaxial/abaxial axis specification
GO:0009947Biological Processcentrolateral axis specification
GO:0010865Biological Processstipule development
GO:0048513Biological Processanimal organ development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MPSQQGGQQH LPTGPTRWCP TPEQLMILEE MYRGGLRTPN ASQIQQITAH LAAYGRIEGK  60
NVFYWFQNHK ARDRQKLRRR LCMSHHLLTC AHYYAAAAAH HHGHGFLAPP VTVPVPPPAY  120
GCGAGGVFDQ AAAVAAGPLL APTSPNPAAA AAYGYYYPAT AFAAAPPASR CAGDATTPPS  180
PNQLFNYHQG GGGVAPADAL GRPEYSLGKL DNFGVSAALD NVDFDMVPAG FEVSAPPPPA  240
FCRQLKTLDL FPGGLKEEQH DVYMTDRSSF ACMVADDDHA LYVRVPYVSV TCVFGTAAAY  300
LCAVGMSSRI IRYCTLPALE QQRSIPSAEH HPALDLCRNP LDLVLPLPAG KLLLTAQPLG  360
QMGFLQNTFS LLIGTGCGIY IAQNYNVPNI KKLMRSLLGR AKELEESYKK PSNGKNKD
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor which may be involved in developmental processes. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004960326.15e-97putative WUSCHEL-related homeobox 2
SwissprotA2XZR33e-55WOX2_ORYSI; Putative WUSCHEL-related homeobox 2
TrEMBLA0A1E5VXX11e-104A0A1E5VXX1_9POAL; Putative WUSCHEL-related homeobox 2
STRINGSi022944m2e-96(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21773897