PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04472.1.g00050.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family BES1
Protein Properties Length: 886aa    MW: 93860 Da    PI: 8.517
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04472.1.g00050.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822206.38.5e-643805072129
                        DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaa 82 
                                   g gr+ptwkErEnnkrRERrRRaiaaki++GLRa Gnyklpk++DnneVlkALcreAGwvvedDGttyrkg+kp+   + a
  Zmw_sc04472.1.g00050.1.am.mk 380 GVGRTPTWKERENNKRRERRRRAIAAKIFTGLRALGNYKLPKHCDNNEVLKALCREAGWVVEDDGTTYRKGCKPP-PGAGA 459
                                   789************************************************************************.88888 PP

                        DUF822  83 gssasaspesslq.sslkssalaspvesysaspksssfpspssldsis 129
                                         sp+ss+q +s+ ss++aspv+sy+as +sssfpsps+l+++ 
  Zmw_sc04472.1.g00050.1.am.mk 460 ALAGMLSPCSSSQlLSAASSSFASPVPSYHASAASSSFPSPSRLENNA 507
                                   88999********9*****************************99875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd006854.67E-581201No hitNo description
Gene3DG3DSA:1.10.600.106.0E-741201IPR008949Isoprenoid synthase domain
SuperFamilySSF485762.24E-641201IPR008949Isoprenoid synthase domain
PfamPF003484.2E-4214201IPR000092Polyprenyl synthetase
PROSITE patternPS0072303147IPR000092Polyprenyl synthetase
PROSITE patternPS004440172184IPR000092Polyprenyl synthetase
PfamPF056872.9E-61381526IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008299Biological Processisoprenoid biosynthetic process
GO:0009741Biological Processresponse to brassinosteroid
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 886 aa     Download sequence    Send to blast
LCLAACGVAG GREAWAMPPA AALEMVHTMS LVHDDLPCMD DDDLRRGKPT CHVVYGEPIA  60
VLAGDALLSL AFRHMASVDS YPADVDPEKH PARVVRAIGE LARCIGSEGL VAGQVVDLEM  120
TGSTGIVPLE KLEYIHLHKT AALLEASVVI GAIIGGGSDE QIERLRKYAR SIGLLFQVVD  180
DILDVTKSSE ELGKTAGKDL ATLRIDERLS SDRANMDASA AHPSPKAESF NSPDQRGGEG  240
PEGKQPQPGR PPHQPLPPPP QWPSSRGWPS SRDKVTVLPS PPRDRASSPV LYPSQGTPRS  300
VPGPREGKLK AAAARHDTSA PLCYSAAGAN KTPPSPPRLL SVASVPGASA PSGGEHSARS  360
RGAAEGGEEG IMSSGAAAGG VGRTPTWKER ENNKRRERRR RAIAAKIFTG LRALGNYKLP  420
KHCDNNEVLK ALCREAGWVV EDDGTTYRKG CKPPPGAGAA LAGMLSPCSS SQLLSAASSS  480
FASPVPSYHA SAASSSFPSP SRLENNAPVT PVLPAAACLQ MLPFLRGLPK LPPLRVSNSA  540
PVTPPLSSPT AASRPPPAKV RRPDWDAAVV GDPFCHPFFA SDVSTVHSGR WISFQMAPTT  600
APASPTYNLV NRCGASSSNS MEMDGSAPAA DRGRGGAEFA FDKGRVVTPW EGERIHEVAA  660
EELELTLGVG AKSIAKMDGA PLAYQLIAII CVQTIRFCEL HPREHEGVEL EWRRSMMYAG  720
LLCISSSGCW SPTGCAMLCL CGVLALLIDE HCAAAGPGAG VPSTVPFRYY NENTSVRAVH  780
GISGFGRPAT VLLSSRPVAE RLFARIAARL GPGGYHTQSG GVPCATPTGR WSFFWFHHSC  840
AVTTPPVRRA VVVGEVVVLL KFGERSDRLR LRNVMWRQLA RRPASC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5xn5_A1e-104120252253Os07g0580900 protein
5xn5_B1e-104120252253Os07g0580900 protein
5xn6_A1e-104120252253Os07g0580900 protein
5xn6_B1e-104120252253Os07g0580900 protein
5xn6_E1e-104120252253Os07g0580900 protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54743453