PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04461.1.g00080.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 450aa MW: 49347.1 Da PI: 8.7586

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04461.1.g00080.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.9	4e-12	142	173	2	33
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLee 33 +++k+ rr+++NReAAr+sR+RKka+i+ Le Zmw_sc04461.1.g00080.1.sm.mkhc 142 PSDKALRRLAQNREAARKSRLRKKAYIQALES 173 589***************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.0E-6	141	204	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	6.2E-8	142	195	No hit	No description
PROSITE profile	PS50217	8.508	143	185	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.6E-8	143	174	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.54E-7	145	185	No hit	No description
PROSITE pattern	PS00036	0	148	163	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	4.3E-27	242	314	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence Send to blast
MDCFMWASVK RAMELYPGYL ENHFNIHKLS CHLPLATGGA PGRHMTSASV RRPPMGIYDY 60 DRRARQQPFP AWAGEPPFRA DSVAAQAVAT GAPPPAAVVG FVEPEVKFVS RVAVAEDDAP 120 LADSPGPPSS DSFGHDRDDA GPSDKALRRL AQNREAARKS RLRKKAYIQA LESSRMKLAW 180 MEQELAAVRR QQVELELGIV QKKGAFVGGS VGESAPTLVD SGVAAFEMEY ARWMEEQARQ 240 AGELRAALQS DASELHLRVL VDAGLAHYDA LFGAKSAAAR RDAFFVLSGA WRAPTERFFL 300 WIGGFRPSEV LKTLEPQLEP LAEQQRAEVR ALQQTARQLE DALSQGLDKL QQTLTEALLA 360 TTAAIDAPHD GGGGYANVPP QQQMAGVFGR LDGLPRFVDQ ADHLRQQTLR NMRKILAPRQ 420 AARGLLALAD YCQRLRALSS LWAARPREPA

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence Send to blast

MDCFMWASVK RAMELYPGYL ENHFNIHKLS CHLPLATGGA PGRHMTSASV RRPPMGIYDY  60
DRRARQQPFP AWAGEPPFRA DSVAAQAVAT GAPPPAAVVG FVEPEVKFVS RVAVAEDDAP  120
LADSPGPPSS DSFGHDRDDA GPSDKALRRL AQNREAARKS RLRKKAYIQA LESSRMKLAW  180
MEQELAAVRR QQVELELGIV QKKGAFVGGS VGESAPTLVD SGVAAFEMEY ARWMEEQARQ  240
AGELRAALQS DASELHLRVL VDAGLAHYDA LFGAKSAAAR RDAFFVLSGA WRAPTERFFL  300
WIGGFRPSEV LKTLEPQLEP LAEQQRAEVR ALQQTARQLE DALSQGLDKL QQTLTEALLA  360
TTAAIDAPHD GGGGYANVPP QQQMAGVFGR LDGLPRFVDQ ADHLRQQTLR NMRKILAPRQ  420
AARGLLALAD YCQRLRALSS LWAARPREPA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021320829.1	1e-155	transcription factor TGAL6 isoform X1
Refseq	XP_021320830.1	1e-155	transcription factor TGAL6 isoform X1
TrEMBL	A0A1Z5R886	1e-153	A0A1Z5R886_SORBI; Uncharacterized protein
STRING	Sb07g004900.1	1e-140	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3571	38	77