PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04453.1.g00090.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 367aa MW: 39281 Da PI: 8.3032

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04453.1.g00090.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.4	4.7e-11	211	256	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr++r + NR +A rs +RK +i eLe+kv++L++e ++L +l Zmw_sc04453.1.g00090.1.am.mk 211 KRAKRIIANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLT 256 9****************************************98765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	9.7E-9	207	273	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.599	209	259	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.4E-9	211	255	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.3E-10	211	259	No hit	No description
SuperFamily	SSF57959	6.43E-10	211	258	No hit	No description
CDD	cd14703	3.57E-24	212	259	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence Send to blast
MSSPIDTGPR SSRPPVGGHM QIPHRTEHAT RHTPLSSSSP QCSAMAMPPK PGDPPQRSPG 60 RSPNLNLPCP LPPIPGGTPQ QQPSGSGPPL PRAVHHRRAR SEVAFRFPDD LGGGGGGSFD 120 DGGSEDDLFS TFMDMDKIAG ADRDRAAETS SPPRPAKHRH SASFDGFGMG GGGEGPGLQQ 180 DGAGGVFGEV MEAKKAMSSE QLAELAAIDP KRAKRIIANR QSAARSKERK ARYITELERK 240 VQTLQTEATT LSAQLTLFQL SEQQAVQHHG NIQLPPHFQP PPNVPTHQML SLPDMMQQDS 300 LGRFQGLDIG KGPVAVKSEA EVVVKSEGSS ISAGRIQSIY VSSAPPGTAN VNHHYYVYWD 360 QVISFHM

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence Send to blast

MSSPIDTGPR SSRPPVGGHM QIPHRTEHAT RHTPLSSSSP QCSAMAMPPK PGDPPQRSPG  60
RSPNLNLPCP LPPIPGGTPQ QQPSGSGPPL PRAVHHRRAR SEVAFRFPDD LGGGGGGSFD  120
DGGSEDDLFS TFMDMDKIAG ADRDRAAETS SPPRPAKHRH SASFDGFGMG GGGEGPGLQQ  180
DGAGGVFGEV MEAKKAMSSE QLAELAAIDP KRAKRIIANR QSAARSKERK ARYITELERK  240
VQTLQTEATT LSAQLTLFQL SEQQAVQHHG NIQLPPHFQP PPNVPTHQML SLPDMMQQDS  300
LGRFQGLDIG KGPVAVKSEA EVVVKSEGSS ISAGRIQSIY VSSAPPGTAN VNHHYYVYWD  360
QVISFHM

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025799971.1	1e-134	transcription factor RF2b-like
TrEMBL	A0A2S3H5C0	1e-133	A0A2S3H5C0_9POAL; Uncharacterized protein
TrEMBL	A0A2T7F053	1e-133	A0A2T7F053_9POAL; Uncharacterized protein
STRING	Pavir.Bb03755.1.p	1e-133	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2683	36	83