PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc04418.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 210aa MW: 23107.9 Da PI: 9.5595 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.6 | 4.3e-11 | 165 | 193 | 6 | 34 |
HHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeek 34 err+++NReAAr+sR+RKka++++Le+ Zmw_sc04418.1.g00010.1.am.mk 165 TERRLAQNREAARKSRLRKKAYVQQLETS 193 59************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57959 | 4.25E-7 | 166 | 207 | No hit | No description |
PROSITE profile | PS50217 | 8.726 | 166 | 210 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.1E-7 | 166 | 196 | No hit | No description |
Pfam | PF00170 | 5.0E-8 | 166 | 197 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 167 | 182 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence Send to blast |
MWPSGPIHSA PRSAGRPAAT TEFGGNSPSV VSTSDSSSAQ NTMSQMSQME LVSPASSAQR 60 QEVMMVTTDD YSYYKPGLAA AAPPPPAPAA APSFQQQPMQ QLHGDHDKHR LVMSPIDEAR 120 HGESVLFFHE QALVRMDRSF GLQHAPARVP VVAFVDGEVG HCAVTERRLA QNREAARKSR 180 LRKKAYVQQL ETSRVRLQQV EHELQRARSQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Required for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025818708.1 | 1e-44 | transcription factor LG2 isoform X1 | ||||
Swissprot | O49067 | 7e-41 | LG2_MAIZE; Transcription factor LG2 | ||||
TrEMBL | A0A2T8IJA5 | 8e-46 | A0A2T8IJA5_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Ea03760.1.p | 2e-40 | (Panicum virgatum) |
Publications ? help Back to Top | |||
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