PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc04291.1.g00060.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 746aa    MW: 83310.3 Da    PI: 11.0511
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc04291.1.g00060.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.43e-494125701128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...............................k 50 
                                   lppGfrFhPtdeelvv+yL++kv++++l++  +i+evd+yk++PwdLp                                k
  Zmw_sc04291.1.g00060.1.am.mk 412 LPPGFRFHPTDEELVVHYLCQKVARQQLPV-AIIAEVDLYKFDPWDLPGarvvcsfpacfslcpvspfslpaptpprhrqK 491
                                   79****************************.88***************4589*******************9999987543 PP

                           NAM  51 vka..eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                     a  ++kewyfF++rd+ky++g+r+nra+ +gyWkatg dk++  k + ++ g+kk Lvfy+g+ap+g+ktdW+mheyr+
  Zmw_sc04291.1.g00060.1.am.mk 492 --AlfGHKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPIAPKgSAKAAGIKKALVFYSGKAPRGVKTDWIMHEYRV 570
                                   ..245899*************************************99666779**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.32E-20408467IPR003441NAC domain
PROSITE profilePS5100556.632412596IPR003441NAC domain
PfamPF023651.0E-25413570IPR003441NAC domain
SuperFamilySSF1019411.7E-35471596IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 746 aa     Download sequence    Send to blast
MSFSELQARG TGVLYKPRGR QTHESASPGR RHGTTGKDPG AFCSDKINRR QFATQPTWCD  60
DSVRPRTGIN ETGWVRSEDY RSRAKRIRSS QGRHRARTAE ATPSCSRNRT EGQKAVCRCS  120
RWLVAGVRAC VTRSFLLQII SLPWIRLPLD SRYDPSIVRR FHPQFHAIGH SPPPAEPERH  180
PAVDGSGPTT NPARRICLPR TVAARAGSTH APRGWGRQAG AGHVLNGKRR WTNLGLSAGC  240
LVARQRRTGN NPHVVPTKTQ PGTTSRQPST PRKESENIEF SRRPRAVPFV EIAEPFDPTP  300
RRRAPQVRTI STREPSRQRR PCSSAAHAAR AERGAQAARA HINGADPARL AAKETALYHP  360
AAVRNQTNRT RGRRGVLTGR GRGRFRSRVV LRRMAMAAQA SGRRDAEAEL NLPPGFRFHP  420
TDEELVVHYL CQKVARQQLP VAIIAEVDLY KFDPWDLPGA RVVCSFPACF SLCPVSPFSL  480
PAPTPPRHRQ KALFGHKEWY FFTPRDRKYP NGSRPNRAAG RGYWKATGAD KPIAPKGSAK  540
AAGIKKALVF YSGKAPRGVK TDWIMHEYRV ADIDRAPGKK GSKKLDEWVL CRLYNKKNNW  600
EKLKVEELHD QVAAAHHRHK EETMDVLADT MSDSFQTHDS DIDNASGMQQ NSFGDMAQGQ  660
TTMPNGMVTV KEDSDWFTDV NFDELQASYM NIGQMENPNQ GQIGQMVNPN QGQMVNPAAG  720
QECHAGYLQS IGAPQMRMWQ TILPPF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-824046027174Stress-induced transcription factor NAC1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP53893761