PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04233.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

BES1

Protein Properties

Length: 873aa MW: 93040 Da PI: 8.7847

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04233.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	205.3	1.7e-63	359	486	2	129
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaa 82 g gr+ptwkErEnnkrRERrRRaiaaki++GLRa Gnyklpk++DnneVlkALcreAGwvvedDGttyr+g+kp+ + a Zmw_sc04233.1.g00010.1.am.mk 359 GVGRTPTWKERENNKRRERRRRAIAAKIFTGLRALGNYKLPKHCDNNEVLKALCREAGWVVEDDGTTYRRGCKPP-PGAGA 438 789**********************************************************************.88888 PP DUF822 83 gssasaspesslq.sslkssalaspvesysaspksssfpspssldsis 129 sp+ss+q +s+ ss++aspv+sy+as +sssfpsps+l+++ Zmw_sc04233.1.g00010.1.am.mk 439 ALAGMLSPCSSSQlLSAPSSSFASPVPSYHASAASSSFPSPSRLENNA 486 88999****9***************************99875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.600.10	4.2E-85	1	246	IPR008949	Isoprenoid synthase domain
CDD	cd00685	8.05E-65	1	244	No hit	No description
SuperFamily	SSF48576	1.1E-72	1	238	IPR008949	Isoprenoid synthase domain
Pfam	PF00348	3.5E-46	14	223	IPR000092	Polyprenyl synthetase
PROSITE pattern	PS00723	0	31	47	IPR000092	Polyprenyl synthetase
PROSITE pattern	PS00444	0	172	184	IPR000092	Polyprenyl synthetase
Pfam	PF05687	1.2E-60	360	505	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0008299	Biological Process	isoprenoid biosynthetic process

Sequence ? help Back to Top
Protein Sequence Length: 873 aa Download sequence Send to blast
LCLAACGVAG GREAWAMPPA AALEMVHTMS LVHDDLPCMD DDDLRRGKPT CHVVYGEPIA 60 VLAGDALLSL AFRHMASVDS YPADVDPEKH PARVVRAIGE LARCIGSEGL VAGQVVDLEM 120 TGSTGIVPLE KLEYIHLHKT AALLEASVVI GAIIGGGSDE QIERLRKYAR SIGLLFQVVD 180 DILDVTKSSE ELGKTAGKDL ASDKTTYPKL LGLEKSREFA EKLLCDAREQ LADFDKEKAA 240 PLRDKVTVLP SPPRDRASSP VLYPGQGTPR SVPGPREGKL KAAAARHDTS APLCYSAAGA 300 NKTPPSPPRL LSVASVPLPS KQGSIRTKWG RGGEHSARSR GAAEGGEEGS MSSGAAAGGV 360 GRTPTWKERE NNKRRERRRR AIAAKIFTGL RALGNYKLPK HCDNNEVLKA LCREAGWVVE 420 DDGTTYRRGC KPPPGAGAAL AGMLSPCSSS QLLSAPSSSF ASPVPSYHAS AASSSFPSPS 480 RLENNAPVTP VLPAAACLQM LPFLRGLPNL PPLRVSNSAP VTPPLSSPTA ASRPPPAKVR 540 RPDWDAAVVG DPFCHPFFAV SAPASPTRAR RRAHPXXHHP RMAPTTAPAS PTYNLVNRCG 600 ASSSNSMEMD GSAPAADRGR GGAEFAFDKG RVVTPWEGER IHEVAAEELE LTLGVGAKSI 660 AKMDGAPLAY QLIAIICVQT IRCCELHPRE HEDVELEEWR RSMMYAGLLF ISSSGCWSPT 720 GCAMLCLCGV LALLIDEHCA AAGPGAGVPS TVPFRYYNEN TSVRAVHGIS GFGRPATVLL 780 SSRPVADRLF ARIAARLGPG GYHTQSGGVP CATPTGRWSF FWFHHSCAVT TPPVRRAVVV 840 GEVVVLLKFG ERSDRLRLRN VMWRQLARRP ASC

Sequence ? help Back to Top

Protein Sequence Length: 873 aa Download sequence Send to blast

LCLAACGVAG GREAWAMPPA AALEMVHTMS LVHDDLPCMD DDDLRRGKPT CHVVYGEPIA  60
VLAGDALLSL AFRHMASVDS YPADVDPEKH PARVVRAIGE LARCIGSEGL VAGQVVDLEM  120
TGSTGIVPLE KLEYIHLHKT AALLEASVVI GAIIGGGSDE QIERLRKYAR SIGLLFQVVD  180
DILDVTKSSE ELGKTAGKDL ASDKTTYPKL LGLEKSREFA EKLLCDAREQ LADFDKEKAA  240
PLRDKVTVLP SPPRDRASSP VLYPGQGTPR SVPGPREGKL KAAAARHDTS APLCYSAAGA  300
NKTPPSPPRL LSVASVPLPS KQGSIRTKWG RGGEHSARSR GAAEGGEEGS MSSGAAAGGV  360
GRTPTWKERE NNKRRERRRR AIAAKIFTGL RALGNYKLPK HCDNNEVLKA LCREAGWVVE  420
DDGTTYRRGC KPPPGAGAAL AGMLSPCSSS QLLSAPSSSF ASPVPSYHAS AASSSFPSPS  480
RLENNAPVTP VLPAAACLQM LPFLRGLPNL PPLRVSNSAP VTPPLSSPTA ASRPPPAKVR  540
RPDWDAAVVG DPFCHPFFAV SAPASPTRAR RRAHPXXHHP RMAPTTAPAS PTYNLVNRCG  600
ASSSNSMEMD GSAPAADRGR GGAEFAFDKG RVVTPWEGER IHEVAAEELE LTLGVGAKSI  660
AKMDGAPLAY QLIAIICVQT IRCCELHPRE HEDVELEEWR RSMMYAGLLF ISSSGCWSPT  720
GCAMLCLCGV LALLIDEHCA AAGPGAGVPS TVPFRYYNEN TSVRAVHGIS GFGRPATVLL  780
SSRPVADRLF ARIAARLGPG GYHTQSGGVP CATPTGRWSF FWFHHSCAVT TPPVRRAVVV  840
GEVVVLLKFG ERSDRLRLRN VMWRQLARRP ASC

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5xn5_A	1e-131	1	242	52	293	Os07g0580900 protein
5xn5_B	1e-131	1	242	52	293	Os07g0580900 protein
5xn6_A	1e-131	1	242	52	293	Os07g0580900 protein
5xn6_B	1e-131	1	242	52	293	Os07g0580900 protein
5xn6_E	1e-131	1	242	52	293	Os07g0580900 protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1943	2	3