PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc04214.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 232aa MW: 25584.7 Da PI: 9.0591 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.2 | 1.2e-10 | 187 | 215 | 6 | 34 |
HHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeek 34 err+++NReAAr+sR+RKka++++Le+ Zmw_sc04214.1.g00010.1.am.mkhc 187 TERRLAQNREAARKSRLRKKAYVQQLETS 215 59************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57959 | 5.0E-7 | 188 | 229 | No hit | No description |
PROSITE profile | PS50217 | 8.726 | 188 | 232 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.3E-7 | 188 | 218 | No hit | No description |
Pfam | PF00170 | 9.2E-8 | 188 | 219 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 189 | 204 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence Send to blast |
MSSVRYCLGR DFQPAAAAAA YFGELEEALI HGGVDPCVIK GDAQTSKQSA GYLAARPPTL 60 EIFASWPMRH QQRLHSGNSP SVVSTSDSSS AQNTMSQMSQ MELVSPASSA QRQEVMMVTT 120 DDYSYYKPGL AAAAPPPPAP AAAPSFQQQP MQQLHGGDHD KHRLVMSPID EARHGGSVLF 180 FHEQALTERR LAQNREAARK SRLRKKAYVQ QLETSRVRLQ QVEHELQRAR SQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Required for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001104893.1 | 2e-75 | transcription factor LG2 | ||||
Swissprot | O49067 | 1e-76 | LG2_MAIZE; Transcription factor LG2 | ||||
TrEMBL | A0A1D6N6P1 | 9e-82 | A0A1D6N6P1_MAIZE; Basic leucine zipper protein | ||||
STRING | GRMZM2G060216_P01 | 6e-75 | (Zea mays) |
Publications ? help Back to Top | |||
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