PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc04191.1.g00060.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 372aa MW: 40246.9 Da PI: 8.9874

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc04191.1.g00060.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.3	9e-15	303	346	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r+rr++kNRe+A rsR+RK+a+i eLe +v++L+++N++L+k+ Zmw_sc04191.1.g00060.1.am.mkhc 303 RRQRRMIKNRESAARSRARKQAYIMELEAEVAKLKEQNEELQKK 346 79***************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	7.1E-12	299	362	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.174	301	346	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.9E-12	303	346	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.2E-14	303	353	No hit	No description
SuperFamily	SSF57959	2.09E-10	303	346	No hit	No description
CDD	cd14707	7.63E-26	303	349	No hit	No description
PROSITE pattern	PS00036	0	306	321	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence Send to blast
LITLLQSPPG ARWPCRFCRR YNKSPPFSSS SLCLWSTPSL VCVGWVEEEE AEMEMPGGSG 60 GQALSRQGSI YSLTFDEFQS ALGGASKDFG SMNMDELLRN IWTAEESNAM ATAATTATAA 120 TAPSVDVNAP APEPIQRQGS FTLPRTLSQK TVEEVWRELV GLVGGDAPAA PAPAPAPVPA 180 NAQTQTQRQP TLGQMTLEDF LVRAGVVREN LGLQSPVLPQ QHGQGLFQQT NAVTPTVRLG 240 NGMVPGVVGQ GVTGAMTVVA PTTPVVLNGF GKVEAGDLSP VPYPFDSTMR VRKGPTVEKV 300 VERRQRRMIK NRESAARSRA RKQAYIMELE AEVAKLKEQN EELQKKQVLE RINKQQGPEA 360 KKLCLRRTLT GP

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence Send to blast

LITLLQSPPG ARWPCRFCRR YNKSPPFSSS SLCLWSTPSL VCVGWVEEEE AEMEMPGGSG  60
GQALSRQGSI YSLTFDEFQS ALGGASKDFG SMNMDELLRN IWTAEESNAM ATAATTATAA  120
TAPSVDVNAP APEPIQRQGS FTLPRTLSQK TVEEVWRELV GLVGGDAPAA PAPAPAPVPA  180
NAQTQTQRQP TLGQMTLEDF LVRAGVVREN LGLQSPVLPQ QHGQGLFQQT NAVTPTVRLG  240
NGMVPGVVGQ GVTGAMTVVA PTTPVVLNGF GKVEAGDLSP VPYPFDSTMR VRKGPTVEKV  300
VERRQRRMIK NRESAARSRA RKQAYIMELE AEVAKLKEQN EELQKKQVLE RINKQQGPEA  360
KKLCLRRTLT GP

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor involved in abscisic acid (ABA) signaling pathway (PubMed:20576316, PubMed:19947981, PubMed:21546455, PubMed:22301130, PubMed:26300907, PubMed:27468891). Transcription factor activity is fully activated by ABA (PubMed:19947981, PubMed:26300907, PubMed:27468891). Acts as positive regulator of the expression of abiotic stress-responsive genes through an ABA-dependent signaling pathway (PubMed:20576316). Acts as positive regulator of ABA signaling and drought stress tolerance (PubMed:22301130). Plays an important role in ABA and auxin responses. Involved in ABA signaling and stress responses by directly binding to the ABA-responsive element (ABRE)-containing genes, especially WRKY family genes. Modulates response to auxin. Suppresses auxin signaling by targeting ABRE-containing genes related to auxin metabolism or signaling (PubMed:21546455). {ECO:0000269\|PubMed:19947981, ECO:0000269\|PubMed:20576316, ECO:0000269\|PubMed:21546455, ECO:0000269\|PubMed:22301130, ECO:0000269\|PubMed:26300907, ECO:0000269\|PubMed:27468891}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by abscisic acid (ABA) (PubMed:20576316, PubMed:18315698, PubMed:21546455, PubMed:22301130). Induced by auxin (PubMed:21546455, PubMed:22301130). Induced by gibberellin (PubMed:21546455). Induced by salt and drought stresses (PubMed:20576316, PubMed:21546455, PubMed:22301130). Induced by cold stress (PubMed:20576316). Induced by oxidative stress (PubMed:20576316, PubMed:22301130). {ECO:0000269\|PubMed:18315698, ECO:0000269\|PubMed:20576316, ECO:0000269\|PubMed:21546455, ECO:0000269\|PubMed:22301130}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025813315.1	1e-145	bZIP transcription factor 46-like
Swissprot	Q69TW5	1e-119	BZP46_ORYSJ; bZIP transcription factor 46
TrEMBL	A0A3L6S319	1e-149	A0A3L6S319_PANMI; ABSCISIC ACID-INSENSITIVE 5-like protein 5
STRING	Pavir.Da01931.1.p	1e-149	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP706	38	147

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Hossain MA, et al. The ABRE-binding bZIP transcription factor OsABF2 is a positive regulator of abiotic stress and ABA signaling in rice. J. Plant Physiol., 2010. 167(17): p. 1512-20 [PMID:20576316] Yang X, et al. Rice ABI5-Like1 regulates abscisic acid and auxin responses by affecting the expression of ABRE-containing genes. Plant Physiol., 2011. 156(3): p. 1397-409 [PMID:21546455] Li YS, et al. A novel nuclear protein phosphatase 2C negatively regulated by ABL1 is involved in abiotic stress and panicle development in rice. Mol. Biotechnol., 2013. 54(2): p. 703-10 [PMID:23086454] Guo C,Ge X,Ma H The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant Mol. Biol., 2013. 82(3): p. 239-53 [PMID:23686450] Huang X, et al. OsSLI1, a homeodomain containing transcription activator, involves abscisic acid related stress response in rice (Oryza sativa L.). ScientificWorldJournal, 2014. 2014: p. 809353 [PMID:25089296] Kim N, et al. Functional characterization and reconstitution of ABA signaling components using transient gene expression in rice protoplasts. Front Plant Sci, 2015. 6: p. 614 [PMID:26300907] Chen H, et al. Characterization of OsPM19L1 encoding an AWPM-19-like family protein that is dramatically induced by osmotic stress in rice. Genet. Mol. Res., 2015. 14(4): p. 11994-2005 [PMID:26505346] Tang N, et al. MODD Mediates Deactivation and Degradation of OsbZIP46 to Negatively Regulate ABA Signaling and Drought Resistance in Rice. Plant Cell, 2016. 28(9): p. 2161-2177 [PMID:27468891]