PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03998.1.g00020.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family HB-other
Protein Properties Length: 736aa    MW: 81468.6 Da    PI: 10.2657
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03998.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox491e-15548602357
                                   --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
                      Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                                   +R +++++q + Lee F++n++p++ +++ LA+ +++t +qV +WF NrRa+ kk
  Zmw_sc03998.1.g00020.1.am.mk 548 RRKRLSHYQSRMLEESFQQNNNPDKVTKQALADTVNVTLKQVHTWFLNRRARLKK 602
                                   6899************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF561121.12E-18238328IPR011009Protein kinase-like domain
Gene3DG3DSA:3.30.200.204.0E-24240323No hitNo description
PfamPF000692.1E-12243330IPR000719Protein kinase domain
PROSITE profilePS5001110.464243593IPR000719Protein kinase domain
SMARTSM002203.5E-5243380IPR000719Protein kinase domain
PROSITE patternPS001070249273IPR017441Protein kinase, ATP binding site
Gene3DG3DSA:1.10.510.105.4E-5329376No hitNo description
PROSITE profilePS5007115.273543603IPR001356Homeobox domain
SuperFamilySSF466894.11E-17546603IPR009057Homeodomain-like
SMARTSM003891.3E-13546607IPR001356Homeobox domain
PfamPF000463.2E-13548602IPR001356Homeobox domain
CDDcd000864.26E-14548604No hitNo description
Gene3DG3DSA:1.10.10.607.1E-16548616IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 736 aa     Download sequence    Send to blast
MKRAQTAVRV FQTNFLRALV LHGDVHRTTI PRGRAPPEEE KGSEERNQPP VTSPHASPNP  60
RAPASASLLS PPQAKRRAPR RSRAPNARGA RFMGGRARSL LRWLRHRSRR VSSSSSSSSF  120
PLTTNDTTTT SGDLHAQSLP HLDRGEEADE SEEEEEEVAE PASEGYIVVE ACGAAGTRAP  180
VPARTQPPRM DSSKKVRAFF PLRRLCFCSS AVTFGSMTIT MCGRRVPMAE SDFFTEYGEA  240
NRYQVSEVIG KGSYGVVAAA IDTQTGERVA IKKIIDVFDH VSDATRILRE VKLLRLLRHP  300
DIVQIKHIML PPSRREFKDI YIRNEKARRY LSNMRKKAPV PFTKKFPGVE PMALHLLKRL  360
LSFDPKERPS ADENHAHANH AARSPRRHHL APLPPARAAC SHENFCDKAA HASVTDGISQ  420
PQLSARSLLK SESISASKCI AYVNGRPGAQ KGYFGLLVVP SPSQHFSGPF CLPPMESTGA  480
PVSPSALELT IATPAWSNIE NNRELALLDA FDHPLSGGEE DAEAHAGMEK EGNEDTQPVG  540
VGPAFQPRRK RLSHYQSRML EESFQQNNNP DKVTKQALAD TVNVTLKQVH TWFLNRRARL  600
KKDKMEQDEK ELNGYKSQVE SLTDETHYLR CKLKKLKKKY NKLKLKQAPP PMALPLPPPP  660
PPQAIAAAVE QQQHQNQVMY VPVLTGLFAN REQSVATTTV TTAPFNAQQG RATAIPGLPI  720
AANTLQLPPP SDYSKN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5ci6_A6e-1724932544120Mitogen-activated protein kinase 6
5ci6_B6e-1724932544120Mitogen-activated protein kinase 6
6dtl_A6e-1724932538114Mitogen-activated protein kinase 6
6dtl_B6e-1724932538114Mitogen-activated protein kinase 6
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1595602RRARLKKD
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP6255422