PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03984.1.g00080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 585aa MW: 63773 Da PI: 9.71 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 161.3 | 3.7e-50 | 154 | 303 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......................kvkaeekewy 59 lppGfrFhPtdeel+ +yL++++ + ++++ +i++vdiyk++Pw Lp+ +++ ++kewy Zmw_sc03984.1.g00080.1.am.mk 154 LPPGFRFHPTDEELILHYLRNRAGSLPCPE-AIIADVDIYKFDPWALPRehpsfpslasddpcvqdphystMAAYGDKEWY 233 79*************************999.88**************95589**********9999988754444899*** PP NAM 60 fFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 fFs+rd+ky++g r+nra+ sgyWkatg+dk+++s+ +ge+vg+kk Lvfykgr pkg+kt+W+mheyrl Zmw_sc03984.1.g00080.1.am.mk 234 FFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIHSTtTGENVGVKKALVFYKGRPPKGTKTNWIMHEYRL 303 **********************************9988999***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.06E-58 | 147 | 336 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 58.72 | 154 | 336 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.7E-27 | 155 | 303 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 585 aa Download sequence Send to blast |
MLLVCVPLQA AAIPLSDGIL SREKKICRGR RKPGPGRSPR KAARWKNRPP TRAGAAEFQR 60 QPSWGPPSPR ISGGITPDPR PTTENGLAPG PRVRRKRVQA AKNPRAYKQA LPSRLCGERR 120 GRSITISAPA RSVDPSRAWE RLVPMVMANP ATSLPPGFRF HPTDEELILH YLRNRAGSLP 180 CPEAIIADVD IYKFDPWALP REHPSFPSLA SDDPCVQDPH YSTMAAYGDK EWYFFSPRDR 240 KYPNGIRPNR AAGSGYWKAT GTDKPIHSTT TGENVGVKKA LVFYKGRPPK GTKTNWIMHE 300 YRLAADANAG HAYHPMKFRN ASMRLDDWVL CRIYNKTSHA SPTPVPSFPD HEQDERCGFD 360 EALYTTSSSA GMNILQGGVA ASAFPMQQAA TGGTQMMPRI QSFSELLNEY SLAQFFDDGG 420 VQDAVPHLDQ QHHAPLLGHP VASHLLVNNG NSNMSGQLLL ANSTASTSAA AAGDGSMVGG 480 KRMRTEESWS HHQAAAVKKP NSSCIGATGV YAETPWNCEE QCSADEDHYP GHIPCSVYLP 540 VSRLGSQAGR RVRSAHAGAT VVALHGVLEL VQHDAAWPPG GRSHA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3swm_A | 1e-64 | 153 | 340 | 19 | 172 | NAC domain-containing protein 19 |
3swm_B | 1e-64 | 153 | 340 | 19 | 172 | NAC domain-containing protein 19 |
3swm_C | 1e-64 | 153 | 340 | 19 | 172 | NAC domain-containing protein 19 |
3swm_D | 1e-64 | 153 | 340 | 19 | 172 | NAC domain-containing protein 19 |
3swp_A | 1e-64 | 153 | 340 | 19 | 172 | NAC domain-containing protein 19 |
3swp_B | 1e-64 | 153 | 340 | 19 | 172 | NAC domain-containing protein 19 |
3swp_C | 1e-64 | 153 | 340 | 19 | 172 | NAC domain-containing protein 19 |
3swp_D | 1e-64 | 153 | 340 | 19 | 172 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025798103.1 | 1e-151 | NAC domain-containing protein 10-like | ||||
TrEMBL | A0A3G2LN22 | 1e-166 | A0A3G2LN22_9POAL; NAC transcription factor | ||||
STRING | Si036303m | 1e-141 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1237 | 36 | 123 |