PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03977.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 1678aa MW: 181394 Da PI: 9.7193

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03977.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.9	2.9e-30	210	268	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++++itY++eHnh+ Zmw_sc03977.1.g00030.1.am.mk 210 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPSMLVITYNSEHNHP 268 699**********************998**************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50811	32.696	204	270	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	2.0E-30	206	270	IPR003657	WRKY domain
SuperFamily	SSF118290	1.44E-25	207	270	IPR003657	WRKY domain
SMART	SM00774	1.6E-38	209	269	IPR003657	WRKY domain
Pfam	PF03106	1.6E-25	211	268	IPR003657	WRKY domain
SuperFamily	SSF103473	1.7E-20	1149	1358	IPR020846	Major facilitator superfamily domain
CDD	cd06174	3.05E-11	1156	1353	IPR020846	Major facilitator superfamily domain
Gene3D	G3DSA:1.20.1250.20	2.6E-6	1167	1360	No hit	No description
Pfam	PF00854	6.4E-87	1220	1632	IPR000109	Proton-dependent oligopeptide transporter family
SuperFamily	SSF103473	1.7E-20	1434	1671	IPR020846	Major facilitator superfamily domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0006810	Biological Process	transport
GO:0016020	Cellular Component	membrane
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0005215	Molecular Function	transporter activity
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1678 aa Download sequence Send to blast
MCDYFSPKME GDHHNPAGDL ADIVRAGGVG LAELPSTATE WHLLAEPGTL FPPPQPSSSD 60 GHGFGDALAG LPDPFGLSDY RASSGRGAAD FEAPVGGRGG GGGGTLVDGG GGGVVLPRTM 120 QMPVLSPREI RPYPRIMGGD AVKLAIPTMM PGIAVGQPCA FDVVGGLQMP SPRGGGGGIK 180 RRKNQARNVI CIPAPAALAG GRTTGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG 240 CPARKQVERS RADPSMLVIT YNSEHNHPWP TQRNALAGST RSHHARNNGS NSSSSSSKQN 300 NSLQKQMVKA EPDQTAAAAT TTTSTSNGTP QATAVKEEEM IASEMEKRMQ QNATDHGTSV 360 ALDPGDLMQQ MFNQSYRPMI PEGGHHDDFF AELTELESNP MSLIFSREYM ETKPGGEPAG 420 KEMAAPNGLA DPLFEMLDWG ATIASVATSA GSSSLEQGES VGAYQCPRRT PCISQQFDLT 480 RHARTSDPFA NLQEASGCLS NLGRAVWEHA CTSNKRVSKT AFHRVLGERA RGRRYRLYAL 540 RSGQRKAMDK KGPAYTGGPR ARVAALNRMP TTEPGIPNGS RADHRLARRP RAVSYRARPP 600 GSFRAVDAPR SCPGRGRRSR QARMAANLPA VEAKHQVHRI HRRGRTARHG TNNGTNRPRH 660 TFACQQLATD WSVSAPKANQ ILSYATRTRM ANSVAALLVS AVEADSFRRH ATNRAWPHQT 720 WHLDRSRDQL SITLNARCCN QVNISIEQVV TGNPRRACFD AACQCRGWGQ QQSFTARGRV 780 FVATHGASVP WCGCRRSSSA SQPTCNAWVM QMLHWRKQTD DHKFSPLLPF LAPKQISTCP 840 QHKKRTQATT PHPTWRPPTL VVPAAERRPG NVRAWPRARA RRRFFGADHA AACTAAPTAR 900 AQKLPAPAAS GDRSTTGSPS AAPAHAAVSR GERVLSSSSL ACAIHYPPVL PCSGGESETR 960 RHLAELKRSR TRAPRLFYAR RRRRGTNPPA LTNLHRGQGG VRDATGCACA FAWRGRASYI 1020 TRAAAPQQGT NSAEEHSVPF PSKNHLALAA HSIRPIGMDS GDAMERGEQA LLLPEVNHHK 1080 HFPVLARCIR KALERGDDAR SDADVERNVY KGTGAVDDED TGVGGGSRSH GPKFQDESLE 1140 VPLLKDKKRR RSKAPAVVLG FECLESTAFN GIATNLVVYL ETVLHGSNLA SATSVTTWIG 1200 TSYLTPIFGA IVADTFWGNY NTILVSLAVY LLGMMMVTFS AFLPTATVLG GSSVFGAQTV 1260 AFAGLYLVAV GSGGVRSSLL PFGAEQFDDD CPADQESKAS FFSWFYICVD FGMIVSGLFI 1320 VWIQENVSWG LGFGFSTACI ALAFGAFVLA TPMYKRRMPT GTPLKRLSQV VVAACRKMSL 1380 KVPADAGPLF EVSDKVDAQP KIAHTGEFSF LDKAAIISES DLEEIAGEAG SSWKLCTVTQ 1440 VEEFKILLRL LPIWATSIIV SAAFSQLNTT FIQQGSAMNM SILSVPVAPA SMTSFEVVCV 1500 LAWVLLYSKV IVPALRAFSS SGDGEPSQLQ RMGAGRLLMA LSMAISALVE MKRLDSAGHG 1560 QEISIAWQIP QYFFLAGAEV FVYIAQLEFF YEEAPDTMKS TCTSLALLTV ALGNYMSSLI 1620 YAVVEAFTAT ADSPGWISDD LNKGHLDYFF WTMAAMCTLN FVVYSGFAKN YKLKTVLS

Sequence ? help Back to Top

Protein Sequence Length: 1678 aa Download sequence Send to blast

MCDYFSPKME GDHHNPAGDL ADIVRAGGVG LAELPSTATE WHLLAEPGTL FPPPQPSSSD  60
GHGFGDALAG LPDPFGLSDY RASSGRGAAD FEAPVGGRGG GGGGTLVDGG GGGVVLPRTM  120
QMPVLSPREI RPYPRIMGGD AVKLAIPTMM PGIAVGQPCA FDVVGGLQMP SPRGGGGGIK  180
RRKNQARNVI CIPAPAALAG GRTTGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG  240
CPARKQVERS RADPSMLVIT YNSEHNHPWP TQRNALAGST RSHHARNNGS NSSSSSSKQN  300
NSLQKQMVKA EPDQTAAAAT TTTSTSNGTP QATAVKEEEM IASEMEKRMQ QNATDHGTSV  360
ALDPGDLMQQ MFNQSYRPMI PEGGHHDDFF AELTELESNP MSLIFSREYM ETKPGGEPAG  420
KEMAAPNGLA DPLFEMLDWG ATIASVATSA GSSSLEQGES VGAYQCPRRT PCISQQFDLT  480
RHARTSDPFA NLQEASGCLS NLGRAVWEHA CTSNKRVSKT AFHRVLGERA RGRRYRLYAL  540
RSGQRKAMDK KGPAYTGGPR ARVAALNRMP TTEPGIPNGS RADHRLARRP RAVSYRARPP  600
GSFRAVDAPR SCPGRGRRSR QARMAANLPA VEAKHQVHRI HRRGRTARHG TNNGTNRPRH  660
TFACQQLATD WSVSAPKANQ ILSYATRTRM ANSVAALLVS AVEADSFRRH ATNRAWPHQT  720
WHLDRSRDQL SITLNARCCN QVNISIEQVV TGNPRRACFD AACQCRGWGQ QQSFTARGRV  780
FVATHGASVP WCGCRRSSSA SQPTCNAWVM QMLHWRKQTD DHKFSPLLPF LAPKQISTCP  840
QHKKRTQATT PHPTWRPPTL VVPAAERRPG NVRAWPRARA RRRFFGADHA AACTAAPTAR  900
AQKLPAPAAS GDRSTTGSPS AAPAHAAVSR GERVLSSSSL ACAIHYPPVL PCSGGESETR  960
RHLAELKRSR TRAPRLFYAR RRRRGTNPPA LTNLHRGQGG VRDATGCACA FAWRGRASYI  1020
TRAAAPQQGT NSAEEHSVPF PSKNHLALAA HSIRPIGMDS GDAMERGEQA LLLPEVNHHK  1080
HFPVLARCIR KALERGDDAR SDADVERNVY KGTGAVDDED TGVGGGSRSH GPKFQDESLE  1140
VPLLKDKKRR RSKAPAVVLG FECLESTAFN GIATNLVVYL ETVLHGSNLA SATSVTTWIG  1200
TSYLTPIFGA IVADTFWGNY NTILVSLAVY LLGMMMVTFS AFLPTATVLG GSSVFGAQTV  1260
AFAGLYLVAV GSGGVRSSLL PFGAEQFDDD CPADQESKAS FFSWFYICVD FGMIVSGLFI  1320
VWIQENVSWG LGFGFSTACI ALAFGAFVLA TPMYKRRMPT GTPLKRLSQV VVAACRKMSL  1380
KVPADAGPLF EVSDKVDAQP KIAHTGEFSF LDKAAIISES DLEEIAGEAG SSWKLCTVTQ  1440
VEEFKILLRL LPIWATSIIV SAAFSQLNTT FIQQGSAMNM SILSVPVAPA SMTSFEVVCV  1500
LAWVLLYSKV IVPALRAFSS SGDGEPSQLQ RMGAGRLLMA LSMAISALVE MKRLDSAGHG  1560
QEISIAWQIP QYFFLAGAEV FVYIAQLEFF YEEAPDTMKS TCTSLALLTV ALGNYMSSLI  1620
YAVVEAFTAT ADSPGWISDD LNKGHLDYFF WTMAAMCTLN FVVYSGFAKN YKLKTVLS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
4oh3_A	2e-88	1156	1674	35	569	Nitrate transporter 1.1
4oh3_B	2e-88	1156	1674	35	569	Nitrate transporter 1.1

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	95	103	GGRGGGGGG
2	1143	1149	LKDKKRR

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP11	3	3