PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03973.1.g00070.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GRF
Protein Properties Length: 380aa    MW: 41115.1 Da    PI: 8.8839
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03973.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC76.52.7e-24136179245
                           WRC   2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                                    epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+
  Zmw_sc03973.1.g00070.1.am.mk 136 LEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEA 179
                                   69***************************************996 PP

2QLQ54.43.7e-195591137
                           QLQ  1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
                                  s+FT aQ ++L++Q+l+yKyL+a++ vP++Ll++i++
  Zmw_sc03973.1.g00070.1.am.mk 55 SPFTQAQYEELEQQALIYKYLLAGVAVPQDLLLPIRR 91
                                  89*********************************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009513.6E-115591IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166621.075691IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088807.9E-135690IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.711135179IPR014977WRC domain
PfamPF088797.7E-21137178IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MHLASLSPAE DHRASSATTL LPFCRASPLS SAVGADAQQP QPQQYAMSGR WARPSPFTQA  60
QYEELEQQAL IYKYLLAGVA VPQDLLLPIR RGFVYHQPAH PHLLNATGLH VMRDSRGKIL  120
LPPVGYGPYL GKKVDLEPGR CRRTDGKKWR CSKEAAPDSK YCERHMHRGR NRSRKPVEAQ  180
LVAAPLSQPP APPANLAGGF QNHTLYPAIA GSGAGRGGAA TGTFGLGSSG LLHMDTAAPY  240
ATAAGGGSKD LSQLISGGMD SSMDNSWRLL PSQTSPFQVS SYPLYGTLSG LDESTICSLP  300
KTEREPSFFE SDFATNSAKQ ENQTLRPFFD EWPKSRDSWS ELPDNNSLSS FSATQLSISI  360
PMGTSDFNTS SRSPHGIQSR
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that plays a regulatory role in gibberellin-induced stem elongation. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004976689.11e-160growth-regulating factor 3
SwissprotQ6AWY61e-149GRF3_ORYSJ; Growth-regulating factor 3
TrEMBLA0A0A9GJC31e-163A0A0A9GJC3_ARUDO; GRF5
STRINGSi011853m1e-157(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP24633476