PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03966.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 714aa MW: 76444.3 Da PI: 9.4124

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03966.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	116.8	8.7e-37	116	174	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e lkcprCdstntkfCy+nnyslsqPr+fC+aCrryWt+GGalrnvPvGgg r++ k+ Zmw_sc03966.1.g00030.1.am.mk 116 EPGLKCPRCDSTNTKFCYFNNYSLSQPRHFCRACRRYWTRGGALRNVPVGGGYRRHAKR 174 56789************************************************998765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	5.0E-38	99	171	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.789	119	173	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.0E-31	119	173	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	121	157	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 714 aa Download sequence Send to blast
MVQRHFTVFC LALRLTNPRA SRSGRIAAPP STMIFSPAFL DSSSWNDNQQ QQQAHHQQVV 60 ASPGDGTSHE QLLQPSIMGG GALPPEGGGT AQVVVGPAKP MSMSERARLA RIPLPEPGLK 120 CPRCDSTNTK FCYFNNYSLS QPRHFCRACR RYWTRGGALR NVPVGGGYRR HAKRAKPKAA 180 AAAAATPVTT AAATAVLAPG AAAGSTSSTC TTANAPALFG QTAMLGGGNL SMLPPLLRLA 240 DFDAMSLGSS FTGIGKPTLD AVGNYSIGGA SGGAGAGAGL DQWRWHQQMQ GFPFLHAMDQ 300 GSLAPSLAMV MPGAFQLGLD NTDSRGAGTG GGEDGSGEIN GMAPTKREGG YTRGMYGAHH 360 HLTAGARPSI GRILDWFEPI FGSEKGDVRW QAIQSDDGRV SETMQERSRT ISYMEVCLGE 420 DPTRLPAPAG PSLLIASPVL AVRKLATANL EKTSLAFLFP HLTQFPSLLL LRHHQFLTHN 480 KASSSEAQLA QFLQPEDGLA PTPENSSKSF LLLLELSWEE RDACPYYTPF DFHLLSSGQQ 540 GVLCCRCTVR VASGHGPTGQ ARQNRRRPPG TRCIAQPVHN VRSSLALRVR SCLRSQELCS 600 SSTWCALQCT GIAAGNGTEH QTTVTRIGPI LGVDLCRRLI MISASAVQRV FIPGKQKPRL 660 FLLLPNRILI SPPFSPATAP PLVSRSCWDS IVCMRPSEHR ELREMVQMGV TAEV

Sequence ? help Back to Top

Protein Sequence Length: 714 aa Download sequence Send to blast

MVQRHFTVFC LALRLTNPRA SRSGRIAAPP STMIFSPAFL DSSSWNDNQQ QQQAHHQQVV  60
ASPGDGTSHE QLLQPSIMGG GALPPEGGGT AQVVVGPAKP MSMSERARLA RIPLPEPGLK  120
CPRCDSTNTK FCYFNNYSLS QPRHFCRACR RYWTRGGALR NVPVGGGYRR HAKRAKPKAA  180
AAAAATPVTT AAATAVLAPG AAAGSTSSTC TTANAPALFG QTAMLGGGNL SMLPPLLRLA  240
DFDAMSLGSS FTGIGKPTLD AVGNYSIGGA SGGAGAGAGL DQWRWHQQMQ GFPFLHAMDQ  300
GSLAPSLAMV MPGAFQLGLD NTDSRGAGTG GGEDGSGEIN GMAPTKREGG YTRGMYGAHH  360
HLTAGARPSI GRILDWFEPI FGSEKGDVRW QAIQSDDGRV SETMQERSRT ISYMEVCLGE  420
DPTRLPAPAG PSLLIASPVL AVRKLATANL EKTSLAFLFP HLTQFPSLLL LRHHQFLTHN  480
KASSSEAQLA QFLQPEDGLA PTPENSSKSF LLLLELSWEE RDACPYYTPF DFHLLSSGQQ  540
GVLCCRCTVR VASGHGPTGQ ARQNRRRPPG TRCIAQPVHN VRSSLALRVR SCLRSQELCS  600
SSTWCALQCT GIAAGNGTEH QTTVTRIGPI LGVDLCRRLI MISASAVQRV FIPGKQKPRL  660
FLLLPNRILI SPPFSPATAP PLVSRSCWDS IVCMRPSEHR ELREMVQMGV TAEV

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367