PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03962.1.g00120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | VOZ | ||||||||
Protein Properties | Length: 133aa MW: 15678.4 Da PI: 5.8083 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 224 | 3.7e-69 | 22 | 132 | 102 | 212 |
VOZ 102 egetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalal 182 +ge+irewlffdkprraf+sgnrkqrslpdy grgwhesrkqvmk+fgglkrsyymdpqpsss+ewhlyeyein++da+al Zmw_sc03962.1.g00120.1.sm.mk 22 QGESIREWLFFDKPRRAFDSGNRKQRSLPDYGGRGWHESRKQVMKDFGGLKRSYYMDPQPSSSYEWHLYEYEINDCDAFAL 102 69******************************************************************************* PP VOZ 183 yrlelklvdekksakgkvskdsladlqkkl 212 yrle+k++d+kksak+k++++sl+++q+++ Zmw_sc03962.1.g00120.1.sm.mk 103 YRLEFKSSDAKKSAKSKLACNSLNEIQQQM 132 *****************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence Send to blast |
MAQGFEFCPE YQTLPWTGEG DQGESIREWL FFDKPRRAFD SGNRKQRSLP DYGGRGWHES 60 RKQVMKDFGG LKRSYYMDPQ PSSSYEWHLY EYEINDCDAF ALYRLEFKSS DAKKSAKSKL 120 ACNSLNEIQQ QME |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003569827.1 | 9e-73 | transcription factor VOZ1 | ||||
Swissprot | Q9SGQ0 | 5e-54 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | I1HRM9 | 2e-71 | I1HRM9_BRADI; Uncharacterized protein | ||||
TrEMBL | Q0JJ94 | 1e-72 | Q0JJ94_ORYSJ; Os01g0753000 protein (Fragment) | ||||
STRING | BRADI2G50070.1 | 4e-72 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2343 | 38 | 88 |
Publications ? help Back to Top | |||
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