PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03852.1.g00080.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 291aa MW: 32251.3 Da PI: 10.5399

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03852.1.g00080.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.3	9.2e-10	36	89	3	56
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 e +r r+ +NR++Ar+sR ++++++eeL+ ++ L eN a+++ ++ + Zmw_sc03852.1.g00080.1.am.mk 36 EERRRNRMTSNRLSARKSRMKRQQQMEELTASAERLGRENAAMRDSVDGALRRC 89 567889**************************************9988765555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.0E-11	34	98	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.6E-9	34	92	No hit	No description
PROSITE profile	PS50217	10.162	36	99	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.0E-7	36	92	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.01E-7	38	84	No hit	No description
CDD	cd14702	2.92E-14	39	90	No hit	No description
PROSITE pattern	PS00036	0	42	56	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence Send to blast
MSITEVSLHF CYLHSLSVVL LHFFYGITRR AAVTEEERRR NRMTSNRLSA RKSRMKRQQQ 60 MEELTASAER LGRENAAMRD SVDGALRRCR LLERENRVLA AHARELCSAL LLRNSQLRTL 120 GDFAGLPLDV PGVPDHLALL YGGDAQIPVP PPPTAPMPLE IQSLFWPDDV DGAVGMLQLG 180 DTSSRAMTRR RRGPAFSFAT GRALHHVDGA VAIVAACRAF DDEARKPELT ATESLCFRAG 240 VHACVRAIIL AGEEMCVLAS ATSKSKATPP AGRFRIKKMT HCRGRIRPRF P

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022679299.1	2e-55	bZIP transcription factor 53
TrEMBL	K4ALW0	4e-54	K4ALW0_SETIT; Uncharacterized protein
STRING	Si039895m	7e-55	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP12504	28	37