PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03847.1.g00050.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 315aa    MW: 34943.4 Da    PI: 10.0952
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03847.1.g00050.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.51.9e-103171545
                                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                                    k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  Zmw_sc03847.1.g00050.1.sm.mkhc 31 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 71
                                    788*************************9877777766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.9E-82174No hitNo description
SMARTSM003381.7E-72790IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4382973IPR004827Basic-leucine zipper domain
PfamPF001705.2E-73171IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.75E-73174No hitNo description
PROSITE patternPS0003603449IPR004827Basic-leucine zipper domain
PfamPF141446.3E-34113188IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
SIPESIVVGQ GALGAASDSS DRSKDKHGDQ KTLRRLAQNR EAARKSRLRK KAYVQQLENS  60
RLKLTQLEQE LQRARQQGIF ISSSVDQSQS KSGNGALAFD MEYARWLEEH NRQISELRAG  120
VSAHASDTDL RSVVDKIMSH YDEIFRLKGN AAKADVFHVL SGMWKTPAER CFLWLGGFRP  180
SEVLKLLSTQ LEPLTDQQLS GISSLQQSSQ QAEDALSQGM EALQQSLAET LAGSLSSSGS  240
TGNVANYMGQ MAMAMGKLGT LENFLRQADN LRLQTLQQLQ RILTTRQSAR AFLVISDYSS  300
RLRALSSLWL ARPKE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002457410.10.0transcription factor TGA2.3 isoform X1
RefseqXP_021312815.10.0transcription factor TGA2.3 isoform X1
RefseqXP_021312816.10.0transcription factor TGA2.3 isoform X1
SwissprotQ0JNL30.0TGA23_ORYSJ; Transcription factor TGA2.3
TrEMBLC5XQR10.0C5XQR1_SORBI; Uncharacterized protein
STRINGSb03g006790.10.0(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Publications ? help Back to Top
  1. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]