PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03838.1.g00070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 161aa MW: 17427.9 Da PI: 11.1608 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.9 | 5.8e-10 | 67 | 108 | 1 | 42 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 e+e++r+rrk +NR++A+rsR+RK+++++eL+ ++ L ae Zmw_sc03838.1.g00070.1.sm.mk 67 EEERRRQRRKLSNRLSAQRSRARKQQRLDELRASAARLRAEK 108 7899**********************************9996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.880.10 | 2.4E-6 | 64 | 98 | IPR008917 | Transcription factor, Skn-1-like, DNA-binding domain |
SMART | SM00338 | 0.0029 | 66 | 129 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.45 | 69 | 108 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.47E-5 | 71 | 108 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 74 | 89 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 7.27E-11 | 76 | 108 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence Send to blast |
MLSAQEALGL ENLVAPSCCG GARDQDMIAS GFTPWGPESC PSLDQVMMAA SSATPSPPAG 60 QGADEEEEER RRQRRKLSNR LSAQRSRARK QQRLDELRAS AARLRAEKXX XXAAALARRL 120 REARRLLALQ RLARFQPLPP HPMAEQAGGA APAVGLASLM T |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 68 | 76 | ERRRQRRKL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002466386.1 | 1e-33 | DNA-binding protein EMBP-1 | ||||
TrEMBL | C5WZ82 | 3e-32 | C5WZ82_SORBI; Uncharacterized protein | ||||
STRING | Sb01g006850.1 | 4e-33 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13845 | 24 | 29 |