PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03837.1.g00090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | GRF | ||||||||
Protein Properties | Length: 751aa MW: 81797 Da PI: 9.7993 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 73.9 | 1.7e-23 | 544 | 587 | 2 | 45 |
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 epgrCrRtDGKkWRCs+++ +++k+CErH++rgr+rsrk++e+ Zmw_sc03837.1.g00090.1.am.mk 544 LEPGRCRRTDGKKWRCSKEAAPDSKYCERHMQRGRNRSRKPVEP 587 69***************************************997 PP | |||||||
2 | QLQ | 56.2 | 1e-19 | 487 | 522 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++T+aQ ++L++Q+l+yKyL+a++PvPpeLl++i++ Zmw_sc03837.1.g00090.1.am.mk 487 PLTPAQYEELEQQALIYKYLLAGVPVPPELLVPIRR 522 89********************************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00951 | 1.4E-12 | 486 | 522 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
PROSITE profile | PS51666 | 21.754 | 487 | 522 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
Pfam | PF08880 | 1.9E-13 | 487 | 521 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
PROSITE profile | PS51667 | 24.021 | 543 | 587 | IPR014977 | WRC domain |
Pfam | PF08879 | 3.2E-20 | 545 | 586 | IPR014977 | WRC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 751 aa Download sequence Send to blast |
MLPGIQYNVQ RWSKESYVFQ VLLPHPWEGG ARNEMDGAET TCTSSLILTF PASDCRIRND 60 ATPRTYKDDD RASSPLFFSL PASIERKKNH VQLLPPRLGQ STGYWTDRSS AHICKSDVER 120 ICTKVFGELA DKETKLLDVG LLHLATLMVY NVLGFVARLV SSINKQLFGP HKDPPSLETV 180 NTRLKNDTFL AVRGTTADAL PLLGLQEYNV RGTKWITREE FQDLILTWVE KDLRLVFVNK 240 AAVAILGAPL LAISAKNAGR RVPRMEDAVD KVPTPLLAAV FSVGLLLLQD VQHGMHAASP 300 VQATARENLC LRSRAARTGC CQRGQRSMGP GMALSFCLCL RAQSFWTSSA RGKRSETTPQ 360 DGKAKNRSGT AKRLAVSTPT MRPPPRLSGG HEWMAEGSMP PPGPSRVPAI LQTGSGTPIQ 420 AHMASRTGRA ERDNQRQASI DTAMPFASLS PATDHHPSSP STAPPLTPRE DAQRQQQQAM 480 SRRWPAPLTP AQYEELEQQA LIYKYLLAGV PVPPELLVPI RRGFVYHQPP LGYGPPYFGK 540 KVDLEPGRCR RTDGKKWRCS KEAAPDSKYC ERHMQRGRNR SRKPVEPQLV AAPISQPPAQ 600 ANLAGGCQNH TLYSAIAGSG SGAARRGGGA AGVHGLGSAA QMHMNNAAPY ATAAGGGSKD 660 LSYPLPLYGT LSGLDESTTS SLPKTERQPV SLFGSDFAKQ ENQTLRPFFD EWPKSRGSWS 720 ELADDNSLSS FSATQLSISI PMGTSTPAPD D |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2463 | 34 | 76 |