PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03809.1.g00020.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 299aa    MW: 32594.3 Da    PI: 5.2578
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03809.1.g00020.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.15.3e-15105158457
                                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                                      k+ rr+ +NRe+ArrsR+RK+  +  Le  v  L+ eN++L k+l  ++++++
  Zmw_sc03809.1.g00020.1.sm.mkhc 105 AKKMRRMLSNRESARRSRKRKQTHLNDLESQVSRLTDENTSLLKRLADMTQKYK 158
                                     799*************************************99966666666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-16102166IPR004827Basic-leucine zipper domain
PfamPF001704.4E-13104158IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.392104156IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.39E-12106157No hitNo description
Gene3DG3DSA:1.20.5.1704.9E-13106158No hitNo description
CDDcd147026.00E-18107157No hitNo description
PROSITE patternPS000360109124IPR004827Basic-leucine zipper domain
PfamPF124981.6E-22174279IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MAGDSGDDVV EVRCGGGGDP GAYAAVLKRK LDLYCAAVAK SMEAKSEESS LMYPNSQASD  60
TSQLISQASF DGNADSQCKL ANSGTSKEQS DDDGDFEETT NPANAKKMRR MLSNRESARR  120
SRKRKQTHLN DLESQVSRLT DENTSLLKRL ADMTQKYKDA TLDNQNLIVD VDMMRRKVHI  180
AEEAVRRVTG ASMLLLPTTS DMPGSSMPLS SCAYDTASSV VPVQGSMRYF LQASLQDDQT  240
ELDLPNAITP LKNGETHTMA ASLRRVASLE NLQKRIHRDS TNSETALPFS DPEALATGK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1118124RRSRKRK
2118125RRSRKRKQ
3120125SRKRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025805357.11e-135light-inducible protein CPRF2-like
TrEMBLA0A2S3HFB11e-134A0A2S3HFB1_9POAL; Uncharacterized protein
STRINGSi022331m1e-129(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75952943