PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03774.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 397aa MW: 43057.2 Da PI: 10.518

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03774.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	36.4	1.2e-11	50	77	2	29
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtP 29 prlrWtp+LH +Fv+ave+LGG+e P Zmw_sc03774.1.g00050.1.am.mk 50 PRLRWTPDLHMAFVHAVERLGGQEMYSP 77 8**********************97666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.3E-9	46	75	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence Send to blast
MSRIGSSDPQ DKGVRSTRDS ESKKGGGGKV EGSGEKRVPT VRPYNRSKLP RLRWTPDLHM 60 AFVHAVERLG GQEMYSPMDF HFMRGDQRFH GMPFLQRAAA LSSSVSEPGG FFASGNGGGL 120 EVSRLHGLLQ HRQSQMQRRH EWALNQREEI ITRKDVLKPP STSGPQPHHP LAPSPAALRS 180 ERGWWPFTDA RAGVVAAGGE HTRADTGNDV NFGGSSGSSS RPIPWGASGD HHLPFRWRPG 240 SGRSNVVDHV INNNIAMIKR PPDPVLIDQA PGDAQKLEWQ KHVEPRPSTS RLADAGACRK 300 RLLPEVQDLA APDLQLSLSP TTALDAKKRK NTAAGDGQEI IYSSELSISL SLSPPAAASI 360 QQQHPPREKT RGSSGGSGEA VLGQSTLDLT MSIRALE

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence Send to blast

MSRIGSSDPQ DKGVRSTRDS ESKKGGGGKV EGSGEKRVPT VRPYNRSKLP RLRWTPDLHM  60
AFVHAVERLG GQEMYSPMDF HFMRGDQRFH GMPFLQRAAA LSSSVSEPGG FFASGNGGGL  120
EVSRLHGLLQ HRQSQMQRRH EWALNQREEI ITRKDVLKPP STSGPQPHHP LAPSPAALRS  180
ERGWWPFTDA RAGVVAAGGE HTRADTGNDV NFGGSSGSSS RPIPWGASGD HHLPFRWRPG  240
SGRSNVVDHV INNNIAMIKR PPDPVLIDQA PGDAQKLEWQ KHVEPRPSTS RLADAGACRK  300
RLLPEVQDLA APDLQLSLSP TTALDAKKRK NTAAGDGQEI IYSSELSISL SLSPPAAASI  360
QQQHPPREKT RGSSGGSGEA VLGQSTLDLT MSIRALE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004951340.1	1e-121	uncharacterized protein LOC101755438
TrEMBL	A0A1E5V647	1e-121	A0A1E5V647_9POAL; Uncharacterized protein
STRING	Si016955m	1e-120	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2754	36	86