PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03738.1.g00040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 247aa MW: 27070.9 Da PI: 9.7831 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56.5 | 9.7e-18 | 16 | 114 | 57 | 128 |
NAM 57 ewyfFskrdkkyatgkrknra..........................tksgyWkatgkdkevlskkgelvglkktLvfy.. 109 + ++F++ +k+y+tg+rk+r+ ++ +W++tgk+++v++ g++ g+kk+Lv+y Zmw_sc03738.1.g00040.1.sm.mk 16 SRHYFHRPSKAYTTGTRKRRKiqpptaatssssspaaqhqqqqqqqkRSETRWHKTGKTRPVVV-AGRQRGCKKILVLYtn 95 669*****************889******************99988755789************.9999**********55 PP NAM 110 kgrapkgektdWvmheyrl 128 g+++k++kt+Wvmh+y+l Zmw_sc03738.1.g00040.1.sm.mk 96 FGKHRKPQKTNWVMHQYHL 114 47999999*********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 18.498 | 1 | 133 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.83E-20 | 11 | 37 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-7 | 56 | 114 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.83E-20 | 64 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence Send to blast |
MGDIRGHAGL TKDGLSRHYF HRPSKAYTTG TRKRRKIQPP TAATSSSSSP AAQHQQQQQQ 60 QKRSETRWHK TGKTRPVVVA GRQRGCKKIL VLYTNFGKHR KPQKTNWVMH QYHLGEAEEE 120 REGELVVSKI FYQTQPRQCG AAEPSAASSA ATVEMSDQAA AVPVATSSSS AGVAFQGAVG 180 IDEFNFAQFR SSFEEEDGRP ASGLEEVIMG CTSRRATGTE TSGSGSKASA DWQYPSFWPP 240 DNQDHDG |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator involved in xylem formation (PubMed:25265867, PubMed:25535195). Promotes the expression of the secondary wall-associated transcription factor MYB46 (PubMed:25265867). Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867, PubMed:25535195). Acts as upstream regulator of NAC101/VND6 and LBD30/ASL19 (PubMed:25535195). {ECO:0000269|PubMed:25265867, ECO:0000269|PubMed:25535195}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020399939.1 | 2e-84 | NAC domain-containing protein 75 isoform X1 | ||||
Refseq | XP_020399940.1 | 1e-84 | NAC domain-containing protein 75 isoform X2 | ||||
Swissprot | Q9M0F8 | 1e-60 | NAC75_ARATH; NAC domain-containing protein 75 | ||||
TrEMBL | A0A3L6DFR4 | 1e-85 | A0A3L6DFR4_MAIZE; NAC domain-containing protein 73 | ||||
STRING | GRMZM2G115721_P01 | 1e-104 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP31779 | 4 | 4 |
Publications ? help Back to Top | |||
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