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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Zmw_sc03688.1.g00020.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family | WRKY | ||||||||
| Protein Properties | Length: 327aa MW: 36050.9 Da PI: 4.9432 | ||||||||
| Description | WRKY family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | WRKY | 62.5 | 7.5e-20 | 287 | 325 | 1 | 38 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEE CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkv 38
++Dg++WrKYGqK+ kg+++pr+YYrCt a gCpv+k+v
Zmw_sc03688.1.g00020.1.sm.mkhc 287 MNDGCQWRKYGQKVAKGNPCPRAYYRCTVApGCPVRKQV 325
58***************************99*******9 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:2.20.25.80 | 9.0E-20 | 272 | 325 | IPR003657 | WRKY domain |
| SuperFamily | SSF118290 | 2.48E-17 | 280 | 325 | IPR003657 | WRKY domain |
| PROSITE profile | PS50811 | 19.692 | 282 | 327 | IPR003657 | WRKY domain |
| SMART | SM00774 | 5.2E-12 | 287 | 327 | IPR003657 | WRKY domain |
| Pfam | PF03106 | 2.9E-17 | 288 | 325 | IPR003657 | WRKY domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 327 aa Download sequence Send to blast |
MSSKKKRAAI DLSLDVEKTE EDRSNGGDGG GRSKDGEMDR EDGQLKRHGE ALKEEINEEK 60 VVEVVVDRGG KGFKEETKFR TQPGEMEEEK QLAEENNSDD ESDGAETRAK EKHVSAMQEE 120 MEKMEEENRM LRQVVDRTLC DFYELQMKLA AYQQQRADEP KEPEVFLSLG AAAGDLEPKL 180 KRKEQATTPR PSLSSDDTDD GKETDLGLSL SLGTYEEKLE AGHDHDGATG DGGGKAKGNN 240 TFLESRNLGP PPAAGDLAAA GIMSHSVNRA NRKTRVSVRV RCQGPTMNDG CQWRKYGQKV 300 AKGNPCPRAY YRCTVAPGCP VRKQVGE |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_022681574.1 | 1e-104 | probable WRKY transcription factor 9 | ||||
| TrEMBL | J3LHH4 | 1e-104 | J3LHH4_ORYBR; Uncharacterized protein | ||||
| STRING | OB02G40910.1 | 1e-105 | (Oryza brachyantha) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Monocots | OGMP8022 | 34 | 46 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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