PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc03676.1.g00050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 292aa MW: 30944.6 Da PI: 5.4527 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 54 | 3.7e-17 | 119 | 171 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 ++kr rr+ +NRe+ArrsR+RK+a + Le+ v++L++eN +L k+ l++ ++ Zmw_sc03676.1.g00050.1.sm.mkhc 119 DVKRMRRMVSNRESARRSRKRKQAHLTGLETQVDQLQGENASLFKQ---LTDANQQ 171 579**************************************99955...5555444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.5E-17 | 117 | 181 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.059 | 119 | 171 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.2E-14 | 120 | 169 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.81E-13 | 120 | 172 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-13 | 121 | 171 | No hit | No description |
CDD | cd14702 | 6.79E-21 | 122 | 172 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 124 | 139 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence Send to blast |
MKKCPSELEL EAFIGGVESD AEQKPGRVAQ FGDGVMFQAG GGDLSPFSFA DSVSGKQRKV 60 VLCRLSEVMV LAAASPASAT NLNVKESQTL GGTSGSDSDS DSLFDFEGGL CEQSTNKLDV 120 KRMRRMVSNR ESARRSRKRK QAHLTGLETQ VDQLQGENAS LFKQLTDANQ QFTASVTDNR 180 ILKSNVEALR AKVKLAEDMV ARGAVSCGLG HLGLSPALNP RQACRSPDAL SGLEFPGDDA 240 CFTSLSPTEQ VLNSPLQSID NRMASEVTSC GGGGAGVDVW GWDSHPNGGL SK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 133 | 139 | RRSRKRK |
2 | 133 | 140 | RRSRKRKQ |
3 | 135 | 140 | SRKRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that possesses broad binding specificity for DNA promoter elements with the core sequence 5'-ACGT-3'. May be involved in the regulation of genes expressed during seed development (PubMed:7919992). Binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:7919992}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021315644.1 | 1e-138 | basic leucine zipper 9-like isoform X1 | ||||
Swissprot | Q6ETX0 | 1e-116 | RSBZ3_ORYSJ; bZIP transcription factor RISBZ3 | ||||
TrEMBL | A0A194YMZ4 | 1e-137 | A0A194YMZ4_SORBI; Uncharacterized protein | ||||
STRING | Sb04g005020.1 | 1e-137 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2095 | 37 | 96 |
Publications ? help Back to Top | |||
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